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Gene_locus Report for: 9asco-a0a1e5rn88

Hanseniaspora osmophila. Histone deacetylase HDA1

Relationship
Family|Arb2_domain
Block| X
Position in NCBI Life Tree|Hanseniaspora osmophila
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > saccharomyceta: N E > Saccharomycotina: N E > Saccharomycetes: N E > Saccharomycetales: N E > Saccharomycodaceae: N E > Hanseniaspora: N E > Hanseniaspora osmophila: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : LPNM01000005
1 UniProt : A0A1E5RN88
1 UniProt : A0A1E5RN88
1 Interpro : A0A1E5RN88
1 Pfam : A0A1E5RN88
1 PIRSF : A0A1E5RN88
1 SUPERFAM : A0A1E5RN88
Sequence
Peptide
Graphical view for this peptide sequence: 9asco-a0a1e5rn88
Colored MSA for Arb2_domain (raw) 
PLNKSLDNYRFQYLQEMYTFYPLPLIHNPIISEIKAQMENFIIGTTFNPA
QHLTDTQNLVVLIHDTPEMWGKPNPITGVLDPSQTYLIDTTLKIIEWCEK
QKYAIIDITIPTNSQNTVFYSQEVMMYLWDNYLQYFNNMQKIAFIGIGDS
TAGLVHLLGHRDTREYTKCCISFVDKTSLKSIVPLIDQSLVDWYYKNSLV
FASKNHTCWSSNTKPRKKYGRVLKCLKDGMCDIFDEKFEEATDFILDSFE
EFDDDDEDGEDEESST
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
PLNKSLDNYRFQYLQEMYTFYPLPLIHNPIISEIKAQMENFIIGTTFNPA
QHLTDTQNLVVLIHDTPEMWGKPNPITGVLDPSQTYLIDTTLKIIEWCEK
QKYAIIDITIPTNSQNTVFYSQEVMMYLWDNYLQYFNNMQKIAFIGIGDS
TAGLVHLLGHRDTREYTKCCISFVDKTSLKSIVPLIDQSLVDWYYKNSLV
FASKNHTCWSSNTKPRKKYGRVLKCLKDGMCDIFDEKFEEATDFILDSFE
EFDDDDEDGEDEESST

Reference
    Title: Genome Sequences of Three Species of Hanseniaspora Isolated from Spontaneous Wine Fermentations
    Sternes PR, Lee D, Kutyna DR, Borneman AR
    Ref: Genome Announc, 4:E01287, 2016 : PubMed

            


Other Papers

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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