Gene_Locus Report

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Gene_locus Report for: 9alte-g6yut5

Marinobacter manganoxydans; Marinobacter adhaerens Haloalkane dehalogenase

Comment
Other strains: Marinobacter manganoxydans MnI7-9; Marinobacter adhaerens (strain HP15)


Relationship
Family|Haloalkane_dehalogenase-HLD1
Block| X
Position in NCBI Life Tree|Marinobacter manganoxydans MnI7-9
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Alteromonadales: N E > Alteromonadaceae: N E > Marinobacter: N E > Marinobacter manganoxydans: N E > Marinobacter manganoxydans MnI7-9: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AGTR01000053, CP001978
2 UniProt : G6YUT5, E4PJR9
2 UniProt : G6YUT5, E4PJR9
2 Interpro : G6YUT5, E4PJR9
2 Pfam : G6YUT5, E4PJR9
2 PIRSF : G6YUT5, E4PJR9
2 SUPERFAM : G6YUT5, E4PJR9
Sequence
Graphical view for this peptide sequence: 9alte-g6yut5
Colored MSA for Haloalkane_dehalogenase-HLD1 (raw)
MALVSAPLLQHNPVDHSLTIMNNKASSMDFVRTPEKRFERLLDYPFEPHY
VEVDGLRMHYLDEGPANESPVLMMHGEPSWSYLYRHMIPICAAAGHRVIA
PDLIGFGKSDKPTSLDDYSYQQHMDWMQSFLDQLGLTNITLVCQDWGSLL
GLRLAAENPERFRAIVVGNGMLPTGDQTAPPAFKIWKNFALHSPWFPIAR
IINTGSFRKLGPDEMRAYDAPFPGKKYKAGARAFPRLVPMHPDDPASEAN
RNAWKVLERWEKPFLTTFSNGDPITRGGDAYMQKRIPGAKDQPHVTLKGG
HFLQEDSPVPFARAINDLLATLS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MALVSAPLLQHNPVDHSLTIMNNKASSMDFVRTPEKRFERLLDYPFEPHY
VEVDGLRMHYLDEGPANESPVLMMHGEPSWSYLYRHMIPICAAAGHRVIA
PDLIGFGKSDKPTSLDDYSYQQHMDWMQSFLDQLGLTNITLVCQDWGSLL
GLRLAAENPERFRAIVVGNGMLPTGDQTAPPAFKIWKNFALHSPWFPIAR
IINTGSFRKLGPDEMRAYDAPFPGKKYKAGARAFPRLVPMHPDDPASEAN
RNAWKVLERWEKPFLTTFSNGDPITRGGDAYMQKRIPGAKDQPHVTLKGG
HFLQEDSPVPFARAINDLLATLS


Reference
    Title: Genome sequence of deep-sea manganese-oxidizing bacterium Marinobacter manganoxydans MnI7-9
    Wang H, Li H, Shao Z, Liao S, Johnstone L, Rensing C, Wang G
    Ref: Journal of Bacteriology, 194:899, 2012 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
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