Gene_Locus Report

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Gene_locus Report for: strgg-b1vyh0

Streptomyces griseus subsp. griseus; Streptomyces chrysomallus Putative secreted protein

Comment
Other strains: Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350); Streptomyces chrysomallus only c-term Pfam A Abhydrolase_8 157 331


Relationship
Family|Duf_1023
Block| X
Position in NCBI Life Tree|Streptomyces griseus subsp. griseus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Streptomycetales: N E > Streptomycetaceae: N E > Streptomyces: N E > Streptomyces griseus group: N E > Streptomyces griseus subgroup: N E > Streptomyces griseus: N E > Streptomyces griseus subsp. griseus: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: strgg-b1vyh0
Colored MSA for Duf_1023 (raw)
GKGRAAEVFGNLDRAARVSVVVPGVDTHLLTLERDTRAYRAPVGMAKSLY
RAERSASPGTRTAVIAWADYTAPAGLGMDAALGGLAANGAIRLNAMVAAL
PGASKVSLFCHSYGSVVCGVAAHRAHDRVADIAVAGSPGMRAANAGQLET
GARIWATRDGDDWIGDVPHLEFGGIGHGADPVDPAFGARIVSAAGAAGHS
GYFEPGTESLDNFAAIGVGAYGSVSCARADSACHSGISGQRSG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

GKGRAAEVFGNLDRAARVSVVVPGVDTHLLTLERDTRAYRAPVGMAKSLY
RAERSASPGTRTAVIAWADYTAPAGLGMDAALGGLAANGAIRLNAMVAAL
PGASKVSLFCHSYGSVVCGVAAHRAHDRVADIAVAGSPGMRAANAGQLET
GARIWATRDGDDWIGDVPHLEFGGIGHGADPVDPAFGARIVSAAGAAGHS
GYFEPGTESLDNFAAIGVGAYGSVSCARADSACHSGISGQRSG


Reference
    Title: Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350
    Ohnishi Y, Ishikawa J, Hara H, Suzuki H, Ikenoya M, Ikeda H, Yamashita A, Hattori M, Horinouchi S
    Ref: Journal of Bacteriology, 190:4050, 2008 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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