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Gene_locus Report for: sinmw-a6ugj8

Sinorhizobium medicae (strain WSM419) (Ensifer medicae) Rhizobium sp. (strain NGR234) Alpha/beta hydrolase fold

Relationship
Family|Haloperoxidase
Block| X
Position in NCBI Life Tree|Sinorhizobium medicae
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhizobiales: N E > Rhizobiaceae: N E > Sinorhizobium/Ensifer group: N E > Sinorhizobium: N E > Sinorhizobium medicae: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : CP000739, CP000874
2 UniProt : A6UGJ8, C3KKV3
2 UniProt : A6UGJ8, C3KKV3
2 Interpro : A6UGJ8, C3KKV3
2 Pfam : A6UGJ8, C3KKV3
2 PIRSF : A6UGJ8, C3KKV3
2 SUPERFAM : A6UGJ8, C3KKV3
Sequence
Graphical view for this peptide sequence: sinmw-a6ugj8
Colored MSA for Haloperoxidase (raw)
MTKNFITTEDGVEIFYKDWGSGQPIVFHHGWPLSSDDWDAQMLYFLSKGY
RVIAHDRRGHGRSTQISDGHDIAHYAADVAALATELDLRDTIHIGHSTGG
GEALAYVARHGAGRVAKLVMVGAVPPIMLKTEAYPGGLPMEVFDGLRAQL
AANRSQFFLDLPSGPFYGFNRPDAKVSTGAIQNWWRQGMMGSAKAHYEGI
KAFSETDFTEDLKKIEVPTLVMHGDDDQIVPIDSSARLAVKLLKNGTLKV
YEGYPHGMLTTHADVINPDLLAFIKG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTKNFITTEDGVEIFYKDWGSGQPIVFHHGWPLSSDDWDAQMLYFLSKGY
RVIAHDRRGHGRSTQISDGHDIAHYAADVAALATELDLRDTIHIGHSTGG
GEALAYVARHGAGRVAKLVMVGAVPPIMLKTEAYPGGLPMEVFDGLRAQL
AANRSQFFLDLPSGPFYGFNRPDAKVSTGAIQNWWRQGMMGSAKAHYEGI
KAFSETDFTEDLKKIEVPTLVMHGDDDQIVPIDSSARLAVKLLKNGTLKV
YEGYPHGMLTTHADVINPDLLAFIKG


References
    Title: Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems
    Schmeisser C, Liesegang H, Krysciak D, Bakkou N, Le Quere A, Wollherr A, Heinemeyer I, Morgenstern B, Pommerening-Roser A and Streit WR <8 more author(s)>
    Ref: Applied Environmental Microbiology, 75:4035, 2009 : PubMed

            

    Title: An evolutionary hot spot: the pNGR234b replicon of Rhizobium sp. strain NGR234
    Streit WR, Schmitz RA, Perret X, Staehelin C, Deakin WJ, Raasch C, Liesegang H, Broughton WJ
    Ref: Journal of Bacteriology, 186:535, 2004 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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