Gene_Locus Report

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Gene_locus Report for: pedhc-e0w4a6

Pediculus humanus subsp. corporis (Body louse) Alpha/beta hydrolase domain containing protein 1,3, putative

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Pediculus humanus corporis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Paraneoptera: N E > Psocodea: N E > Phthiraptera: N E > Anoplura: N E > Pediculidae: N E > Pediculus: N E > Pediculus humanus: N E > Pediculus humanus corporis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : DS235886
1 UniProt : E0W4A6
1 UniProt : E0W4A6
1 Interpro : E0W4A6
1 Pfam : E0W4A6
1 PIRSF : E0W4A6
1 SUPERFAM : E0W4A6
Sequence
Graphical view for this peptide sequence: pedhc-e0w4a6
Colored MSA for abh_upf0017 (raw)
MFNFGLFGYGLMEYTSGWYLAGLLITGYISYYLFEVVKQPQLVCAPCKFR
KFLESNLPILHEKYWPTFWCCESRAQTVMAAIVRRTLLPYIQYRREILTL
RDGGEVALDWKEENTTSSSPVVLLFPGLTGTSQTEYVKALAISASKSGIR
FVVFNNRGLGGMALKTPRLYCAANVDDASEVISHVKKLYPTVPLGVLGVS
LGGMILGNYMSRMSDESQKMIAAAMLISVPWNVFVGTKSLEKPILNYLIN
RHLAFCLVRTIKERSQILDCTHDLDQIVKSRTVREFDTRFTAKHFGYENV
SEYYTEASLHTKIPLMKVPTLCLSAADDPMQPLEGIPVEDASKSESVAIL
IPSRGGHIGFMEGLLPIAYDQYMARCFTQYFNAMFENDNYKQFFTTGKEQ
SNN
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MFNFGLFGYGLMEYTSGWYLAGLLITGYISYYLFEVVKQPQLVCAPCKFR
KFLESNLPILHEKYWPTFWCCESRAQTVMAAIVRRTLLPYIQYRREILTL
RDGGEVALDWKEENTTSSSPVVLLFPGLTGTSQTEYVKALAISASKSGIR
FVVFNNRGLGGMALKTPRLYCAANVDDASEVISHVKKLYPTVPLGVLGVS
LGGMILGNYMSRMSDESQKMIAAAMLISVPWNVFVGTKSLEKPILNYLIN
RHLAFCLVRTIKERSQILDCTHDLDQIVKSRTVREFDTRFTAKHFGYENV
SEYYTEASLHTKIPLMKVPTLCLSAADDPMQPLEGIPVEDASKSESVAIL
IPSRGGHIGFMEGLLPIAYDQYMARCFTQYFNAMFENDNYKQFFTTGKEQ
SNN


Reference
    Title: Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle
    Kirkness EF, Haas BJ, Sun W, Braig HR, Perotti MA, Clark JM, Lee SH, Robertson HM, Kennedy RC and Pittendrigh BR <61 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 107:12168, 2010 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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