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Pectin_methylesterase

Relationship

Family: Pectin_methylesterase

Block: X

Parent Family: No family

Comment

Pectin methylesterase. The representative structure is BT1017 Q8A900 a methylesterases (6-O-methyl esterase)essential for pectin rhamnogalacturonan II metabolism from the gut bacterium Bacteroides thetaiotaomicron. This family is exclusivly bacterial . Plant pectin methylesterase are not alpha/bet hydrolases. In many members C-term is DUF3826 a putative sugar-binding domain. Some members are close to Acetyl-esterase_deacetylase or Abhydrolase_7. Carbohydrate Esterase Family 19 (CE_19) of CAZY. This family is different of Pectin_lyase_fold Pectinesterase

Database

Interpro : No interpro

PIRSF : No PIRSF

Pdoc : No Pdoc

Pfam : No Pfam

Prints : No Print

EC Number : No EC Number

Sequences

Peptide in Fasta
Nucleotide in Fasta
Alignment with Multalin Text only
Seed alignment with MAFFT No colour
Alignment with MAFFT No colour
Dendrogram The dnd file

References (2)

Title : Ascertaining the biochemical function of an essential pectin methylesterase in the gut microbe Bacteroides thetaiotaomicron - Duan_2020_J.Biol.Chem_295_18625
Author(s) : Duan CJ , Basl A , Liberato MV , Gray J , Nepogodiev SA , Field RA , Juge N , Ndeh D
Ref : Journal of Biological Chemistry , 295 :18625 , 2020
Abstract : Duan_2020_J.Biol.Chem_295_18625
ESTHER : Duan_2020_J.Biol.Chem_295_18625
PubMedSearch : Duan_2020_J.Biol.Chem_295_18625
PubMedID: 33097594
Gene_locus related to this paper: bactn-q8a900

Title : Complex pectin metabolism by gut bacteria reveals novel catalytic functions - Ndeh_2017_Nature_544_65
Author(s) : Ndeh D , Rogowski A , Cartmell A , Luis AS , Basle A , Gray J , Venditto I , Briggs J , Zhang X , Labourel A , Terrapon N , Buffetto F , Nepogodiev S , Xiao Y , Field RA , Zhu Y , O'Neil MA , Urbanowicz BR , York WS , Davies GJ , Abbott DW , Ralet MC , Martens EC , Henrissat B , Gilbert HJ
Ref : Nature , 544 :65 , 2017
Abstract : Ndeh_2017_Nature_544_65
ESTHER : Ndeh_2017_Nature_544_65
PubMedSearch : Ndeh_2017_Nature_544_65
PubMedID: 28329766

Structures (1)

Genes Proteins in Pectin_methylesterase family (187)

Fragments of genes in Pectin_methylesterase family (1)

Structures in Pectin_methylesterase family (1)

No substrate

No Inhibitor