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Family Report for: PHA_depolymerase_arom

PHA_depolymerase_arom


Genes:Proteins in PHA_depolymerase_arom (20)
I.Order by Gene_locus or oder by Structures or order by number of Papers SpeciesSequence
9psed-q5udq2: Pseudomonas sp. 3Y2 pha depolymerase (fragment)Pseudomonas sp. 3Y2 Show
FNGIGANLELVFPFVAALDPDLEVIAFDVPGVGGSSTPNRPYRFPGLAKL
TARMLDYLDYGQVNVIGVSWGGALAQQFAYNYPERCKKLVLAATAAGTVM
VPGKPKVLWMMASPRRYIQPSHVIRIAPMIYGGAFRRDPTLAASHAAKVR
SAGKLGYYWQLVAGFGWTSIHWLHKINQPTLVLAGDDDPLIPLVNMRLLA
WRIPNAQLHIIDDGHLFLITRAEVVAPIIMKFLEEERQRAVMHPHPAPLG
G
9psed-q6ufw0: Pseudomonas sp. HJ-2 mcl-pha extracellular depolymerasePseudomonas sp. HJ-2 Show
MPFEFRTIELDGQTIRTAVRPGKKHMTPLLIFNGIGANLELVFPFVAALD
PDLEVIAFDVPGVGGSSTPSTPYRFPGLAKLAARMLDYLDYGQVTAIGVS
WGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLWRMASPRRYIQ
PSYGVHIAPDIYGGAFRRDPKLAMAFASKVRSSGKMGYYWQLFAGLGWTS
IHWLHKIRQPTLILAGDDDPIIPLINMRMLAWRIPNAELHVIDDGHLFLV
TRAETVAPIIMKFLQEERQRAVIHPRPFTPKAS
9sphn-q2n9u0: Erythrobacter litoralis HTCC2594 poly(3-hydroxyalkanoate) depolymeraseErythrobacter litoralis HTCC2594 Show
MEEVGGRTLRVAKWRLDAPSDHPPILFFNGIGANIEAVAPLAEVLDDRAF
IMFDMPGVGESPDPVLPYNPFTMSWTAAQLLGRYDIDEVDVLGISWGGAM
AQHFALQHGARTRRLVLIATTPGMAMVPGNPAAFTKMANPRRYIDPDFMN
EHFATLYGGATENPGQKAEHVGRLKPPSPRGYLYQLLCMLGWTSLPALPF
LGKETLVMMGDDDQIVPVINGKILARMIPNARLEVVEGGGHLFLLTHADE
SIALIRDFLDAPENAESKAA
burca-PHAZ: Burkholderia caryophylli pha depolymeraseBurkholderia caryophylli Show
MPQPYVFRTVDLDGQSIRTAVRPGKSHLTPLLIFNGIGANLELVFPFIQA
LDPDLEVIAFDVPGVGGSSTPRRPYRFPGLAKLTARMLDYLDYGQVNVIG
VSWGGALAQQFAHDYPERCKKLVLAATAAGAVMVPGKPKVLWLMASPRRY
IQPSHVIRIAPDIYGGAFRRDPDLALSHAAKVRSSGKLGYYWQLFAGLGW
TSIHWLHKIQQPTLVLAGDDDPLIPLINMRLLAWRIPNAQLHIIDDGHLF
LVTRAEAVAPIIMNFLQQERQRAVMHPRPAPGG
burs3-q396v5: Burkholderia sp. (strain 383) Burkholderia cepacia strain ATCC 1776 poly(3-hydroxyalkanoate) depolymeraseBurkholderia sp. Show
MHSADAAGSDLPGRAPAAPTVAPGAADGRTTGGGFVIRTIDVNGQVLRVG
VKPGSDASPPLLVFNGIGANLELLEPFVAALDDVRVIAFDVPGVGGSPAP
LVPYRFSTLSVLADRLLARLGHDGPVDVLGVSWGGALAQQFARLYPVRCR
RLVLAATSPGVVMVPGRPSVLAKLAGPRRYTDPGYLSRIGADLYGGAYRR
DPAMLAEHGRHIQPPRGRGYLYQLLAATGWTSLPWLHALRQPTLVLHGND
DPIVPLVNARILAARIRRAELHVIDDGHLFLVARADEVAPMVKRFLRKAI
D
cuppj-q46zd3: Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) (Alcaligenes eutrophus) (Ralstonia eutropha) poly(3-hydroxyalkanoate) depolymeraseRalstonia eutropha Show
MTTNNASPEAGHIMQTRTVDLDGQVLRVGIRPGSGDLPPLLMFNGIGANL
ELVEPFVDALPDVEVIIFDIPGAGGSPAPLFPYRFSNLCVMADKLLSHLG
YAGPVDTLGVSWGGALAQEFARLYPQRCRRLVLAATSPGVLMVPGSPSVL
TKMIGIRRYTDAEYLRRVGGDIYGGAFRDDPSLLDVHGGHMRPPRGRGYL
YQLLAAWGWSSLPWLRALKQRTLVLHGSDDPIVPLINAKILSGCIPDSAL
HVFHDDGHLFLLTAARESARVVGEFLREGR
novad-q2g8e5: Novosphingobium aromaticivorans (strain DSM 12444) alpha/beta hydrolaseNovosphingobium aromaticivorans Show
MIGVAGRRLHVARWHSGASERPPLLLLNGIGMNLELLAPVARSLPEREVI
CFDMPGTGNSPDPVFPYSISCMALTTASLLDRLEIDRADVLGISWGGAVA
QQFAFQHRARIGKLVLAATAAGATMIPGNAALLAHLSDPREYSVERTLKR
NLASIYNGGGSARVSLNAAKAPSPLGFSYQMAAFASWSSLPILPMLSMPV
MVMADEEDQLVPPSNAHFLHHAIAHSELEMFRGGGHLFMLSQRERFVARL
RTFLDDDAHAC
pse14-q48pi8: Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) poly(3-hydroxyalkanoate) depolymerase (EC 3.1.1.-), 1 reference(s)Pseudomonas syringae pv. phaseolicola Show
MPQPFVFRSIDLNGHTIRTAVRPGKSHLTPLLIFNGIGANLELVFPFVEA
LDPDLEVIAFDVPGVGGSSTPNRPYRFPGLAKLAARMLDYLNYGQVNAIG
VSWGGALAQQFAHDYPERCKKLVLAATSAGMAMVPGKPRVLWLMASPRRY
IQPSHVIRIAPEIYGGAFRRDPNLAANHAAKVRSSGKLGYYWQLFAGMGW
TSIHWLHKVHQPTLVLAGDDDPLIPLVNMRLLAWRIPNAQLHIIDDGHLF
LITRAEAVAPIIMGFLQQERQRAVMHPQPTPPRTR
pseae-phaD: Pseudomonas aeruginosa phaD gene pha-depolymerase (poly(3-hydroxyalkanoic acid) depolymerase) PA5057, 5 reference(s)Pseudomonas aeruginosa Show
MPQPFVFRTIDLDGQTIRTAVRPGKEGSTPLLIFNGIGANLELVFPFVQA
LDPELEVIAFDVPGVGGSSTPSVPYRFPGLAKLAARMLDYLDYGQVNAIG
VSWGGALAQQFAHDYPERCKKLILAATSAGAVMVPGKPKVLMRMASPRRY
IQPSYGVHIAPDIYGGAFRRDPKLAMAHASKVRSSGKLGYYWQLFAGLGW
TSIHWLHRIRQPTLVLAGDDDPIIPLINMRVLAWRIPNAELHVIDDGHLF
LVTRAESVAPIIMKFLAEERRRAVMHPRPFLPKTG
psecl-PHAZ: Pseudomonas chlororaphis (Pseudomonas aureofaciens): Intracellular EY04_01535 PHAZ, 1 reference(s)Pseudomonas chlororaphis Show
MPQPFIFRTVDLDGQTIRTAVRPGKPHLTPLLIFNGIGANLELVFPFVQA
LDPDLEVIAFDVPGVGGSSTPSRPYRFPGLAKLTTRMLDYLDYGQVNVVG
VSWGGALAQQFAYDYPERCKKLVLAATAAGAFMVPGKPKVLWMMASPRRY
IQPSHVIRIAPLIYGGSFRRDPNLAAEHASKVRSAGKLGYYWQLFAGLGW
TSIHWLHKIHQPTLVLAGDDDPLIPLINMRMLAWRIPNAQLHIIDDGHLF
LITRAEAVAPIIMKFLEEERQRAVMHPHPTPFSGT
pseme-PHAZ: Pseudomonas mendocina, Pseudomonas stutzeri, Pseudomonas pseudoalcaligenes, Pseudomonas sp., Pseudomonas nitroreducens, pha depolymerase, 5 reference(s)Pseudomonas mendocina Show
MPQPFVFRTIDLDGQTIRTAVRPGNSQLVPLLIFNGIGANLELVMPFVAA
LDPELEIIAFDVPGVGGSSTPATPYRFPGLAKLAARMLDYFDYGQVNAIG
VSWGGALAQQFAHDYPERCKKLILAATSAGAVMVPGKPKVLWRMASPRRY
VQPSYGVRIAPDIYGGAFRRDPKLAMAHASKVRSGGKMGYYWQLFAGLGW
TSIHWLHKIRQPTLVMAGDDDPLIPLINMRLLAWRIPNAELHIIDDGHLF
LVTRAEAVAPIIMKFLEEERHRAVMHPQPTPVRQH
pseol-phab: Pseudomonas oleovorans depolymerase (phaB), 2 reference(s)Pseudomonas oleovorans Show
MPQPYIFRTVELDNQSIRTAVRPGKPHLTPLLIFNGIGANLELVFPFIEA
LDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLTARMLDYLDYGQVNVIG
VSWGGALAQQFAHDYPERCKKLVLAATAAGAVMVPGKPKVLWMMASPRRY
VQPSHVIRIAPTIYGGGFRRDPELAMQHASKVRSGGKMGYYWQLFAGLGW
TSIHWLHKIQQPTLVLAGDDDPLIPLINMRLLAWRIPNAQLHIIDDGHLF
LITRAEAVAPIIMKFLQQERQRAVMHPRPASGG
psepf-PHAZ: Pseudomonas fluorescens, Pseudomonas mediterranea, Pseudomonas corrugata, Pseudomonas sp., Comamonas testosteroni (Pseudomonas testosteroni), Pseudomonas chlororaphis (Pseudomonas aureofaciens), Pseudomonas brassicacearum, poly(3-hydroxyalkanoate) depolymerase, 6 reference(s)Pseudomonas fluorescens Show
MPHPFIFRTVELDGQTIRTAVRPGKPHLTPLLIFNGIGANLELVFPFVAA
LDPDLEVIAFDVPGVGGSSTPSRPYRFPGLAKLTARMLDYLDYGQVNVIG
VSWGGALAQQFAYDYPERCKKLVLAATAAGAVMVPGKPKVLWMMASPRRY
IQPSHVIRIAPMIYGGSFRRDPTLAASHAAKVRSAGKLGYYWQLFAGLGW
TSIHWLHKIHQPTLVLAGDDDPLIPLINMRMLAWRIPNAQLHIIDDGHLF
LITRAEAVAPIIMKFLQEERQRAVMHPHPTPLGG
psepf-q3kch8: Pseudomonas fluorescens (strain PfO-1) alpha/beta hydrolase foldPseudomonas fluorescens Show
MTTHRLTTKGLQLNVSICGQGSPLLLLNGLGGLIRTFDPLRNELDDFMTI
TLDVPGVGKSQMPRWPFRLPRHTDVIAGMLEQLGIDQVDVFGVSWGGALA
QEFALRYPSRVRRLILAATSPGPLLLMKPADVMDFFRKSKNTKTHQQERS
GHSVQTLLRFGVMKGMLSVNPRTYYFQLAALIGWTSLLRLSRLLQRTLIL
AGDRDPLIQAYNGHILRRTIGRSELRLLKGEGHFFVVTSAGRTAVLVREF
LCRHYDDEEKAPRIAN
psepu-PHAZ: Pseudomonas putida, Pseudomonas sp., Pseudomonas entomophila, pha depolymerase poly(3-hydroxyalkanoate)depolymerase (phaZ), 6 reference(s)Pseudomonas putida Show
MPEPYIFRTVELDDQSIRTAVRPGKPHLTPLPIFNGIGANLELVFPFIEA
LDPDLEGIAFDVPGVGGSSTPRHPYRFPGLAKLTARMLDYLDYGQVSAIG
VSWGGALAQQFAHDYPERCKKLVLAATAAGAVMVPGKPKVLWMMASPRRY
VQPSHVIRIAPMIYGGAFRRDPDLAMHHASKVRSGGKMGYYWQLFAGLGW
TSIHWLHKIHQPTLVLAGDDDPLIPLINMRLLAWRIPNAQLHTIDDGHLF
LITRAEAVAPIIMKFLQEERQRAVMHPRPASGG
psepu-q6pli2: Pseudomonas putida polyhydroxyalkanote depolymerasePseudomonas putida Show
MPQPYVFRTVELDDQSIRTAVRPGKPHLTPLLIFNGIGANLELVFPFIEA
LDPDLEVIAFDVPGVGGSSTPRQPYRFPGLAKLTARMLDYLDYGQVNVIG
VSWGGALAQQFAHDYPERCKKLVLAATAAGAVMVPGKPKVLWMMASPRRY
VQPSHVMRIAPLIYGGAFRRDPPLAARHAAKVRSGGKLGYYWQLFAGLGW
TSIHWAAQDQPADSGLAGDDDPLIPLINMRLLAWRIPNAQLHIIDDGHLF
LIIRAEAVAPIIMKFLEQERQRARMHPRPASGT
psere-PHAZ: Pseudomonas resinovorans pha depolymerase, 1 reference(s)Pseudomonas resinovorans Show
MPLPFVFRTIELDGQTIRTAVRPGQSHMTPLLIFNGIGANLELVFPFVQA
LDPDLEVIAFDVPGVGGSSTPSRPYRFSSLAKLAARMLDYLDYGQVSVIG
VSWGGALAQQFAHDYPERCKKLILAATSAGAVMVPGKPKVLWRMASPRRY
IQPSYGVHIAPDIYGGAFRRDPGLAMAHASKVRSSGKMGYYWQLFAGLGW
TSIHWLHRIRQPTLVLAGDDDPIIPLVNMRLLAWRIPNAELHVIDDGHLF
LVTRAETVAPIIMKLLAEERQRAVIHPQAVPLRSG
psesp-Est33: Pseudomonas sp. strain E5-12 Esterase Est33, 1 reference(s)Pseudomonas sp. Show
MTTRKLIIKDLQLNVSISGQGSPLLLLNGLGGLIRTFDSLRDELGDFMTI
TLDVPGVGKSQMPRWPMRLPRHADLIAEMLKQLGVDQVDVFGVSWGGALA
QEFALRHPSMVRRLILAATSAGPVVLVKPADILEFFGSSKGAKLRKKEGS
RNSIQALLRFGVAKGMLTGNPRTYYHQLAALVGWTSLLRLFRLRQRTLIL
TGDRDTLVQMYNAHILRRAIRRAEVHVLEGEGHFFVVTSAKRTAELIREF
LCQQHDDEEPVPMIASGRLRPRLL
psesy-PHAB: Pseudomonas syringae (pv. tomato) poly(3-hydroxyalkanoate) depolymerase, 1 reference(s)Pseudomonas syringae Show
MPQPFVFRSIDLNGHTIRTAVRPGKSHLTPLLIFNGIGANLELVFPFVEA
LDPDLEVIAFDVPGVGGSSTPKRPYRFPGLAKLAARMLDYLNYGQVNAIG
VSWGGALAQQFAHDYPERCKKLVLAATSAGMAMVPGKPRVLWLMASPRRY
IQPSHVIRIAPEIYGGAFRRDHNLAANHAAKVRSSGKLGYYWQLFAGMGW
TSIHWLHKIHQPTLVLAGDDDPLIPLVNMRLLAWRIPNAQLHIIDDGHLF
LITRAEAVAPIIMGFLQQERQRAVMHPQPTPTRTR
sphal-q1grr6: Sphingopyxis alaskensis (Sphingomonas alaskensis) alpha/beta hydrolase foldSphingopyxis alaskensis Show
MSRISGRPAISTQHVHGLTLRVARWRQGAPGTPLLFLNGIGADIAAAAPL
LAQMHGREAWTLDMPGVGGSPDALLPYAAPTMAAIVMEIARRFGHESLDV
AGFSWGGALAQQVAIQFPGRVRRLVLMATTPSVGAPGIGWAALLDDDMLA
SGLRRPTATPLGLAYQSLAMAGWTSAAMLPLLKDVPVLVLMGERDGVVPA
CHGQTIAELIDGAVLEVVPGSHLFPFTHAGTVAARISAFLERPPLQAAA
Sequences



Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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