ABHD17-depalmitoylase

Relationship

Family: ABHD17-depalmitoylase

Block: X

Parent Family: Hydrolase_4

Comment

ABHD17 proteins are protein depalmitoylases that regulate N-Ras palmitate turnover and subcellular localization (Lin and Conibear 2015) They are probably themselves palmitoylated. ABHD17A, 17B, and 17C, are identified as the physiological PSD-95 (the most abundant postsynaptic density scaffolding protein) depalmitoylating enzymes in neurones (Yokoi et al.). The acyl protein thioesterases (APT1:LYPLA1, APT2: LYPLA2) are G protein depalmitoylases and accept also a number of S-palmitoylated protein and phospholipid substrates. They belong to a closely related family: LYsophospholipase_carboxylesterase

Database

Interpro : IPR022742 Hydrolase_4 Serine aminopeptidase, S33

PIRSF : No PIRSF

Pdoc : No Pdoc

Pfam : PF12146 Hydrolase_4

Prints : No Print

EC Number : 3.1.2.22

Sequences

Peptide in Fasta
Nucleotide in Fasta
Alignment with Multalin Text only
Seed alignment with MAFFT No colour
Alignment with MAFFT No colour
Dendrogram The dnd file

References (11)

Title : Attenuating ABHD17 enhances S- palmitoylation, membrane localization and signal transduction of NOD2 and Crohn's disease-associated variants - Dixon_2023_bioRxiv__
Author(s) : Dixon CL , Martin NR , Niphakis MJ , Cravatt BF , Fairn GD
Ref : Biorxiv , : , 2023
Abstract : Dixon_2023_bioRxiv__
ESTHER : Dixon_2023_bioRxiv__
PubMedSearch : Dixon_2023_bioRxiv__
PubMedID: 38187608

Title : ABHD17 regulation of plasma membrane palmitoylation and N-Ras-dependent cancer growth - Remsberg_2021_Nat.Chem.Biol__
Author(s) : Remsberg JR , Suciu RM , Zambetti NA , Hanigan TW , Firestone AJ , Inguva A , Long A , Ngo N , Lum KM , Henry CL , Richardson SK , Predovic M , Huang B , Dix MM , Howell AR , Niphakis MJ , Shannon K , Cravatt BF
Ref : Nat Chemical Biology , : , 2021
Abstract : Remsberg_2021_Nat.Chem.Biol__
ESTHER : Remsberg_2021_Nat.Chem.Biol__
PubMedSearch : Remsberg_2021_Nat.Chem.Biol__
PubMedID: 33927411
Gene_locus related to this paper: human-ABHD17A , human-ABHD17B , human-ABHD17C

Title : Chemical proteomic analysis of palmostatin beta-lactone analogs that affect N-Ras palmitoylation - Suciu_2021_Bioorg.Med.Chem.Lett_53_128414
Author(s) : Suciu RM , Luvaga IK , Hazeen A , Weerasooriya C , Richardson SK , Firestone AJ , Shannon K , Howell AR , Cravatt BF
Ref : Bioorganic & Medicinal Chemistry Lett , 53 :128414 , 2021
Abstract : Suciu_2021_Bioorg.Med.Chem.Lett_53_128414
ESTHER : Suciu_2021_Bioorg.Med.Chem.Lett_53_128414
PubMedSearch : Suciu_2021_Bioorg.Med.Chem.Lett_53_128414
PubMedID: 34666187

Title : Site specific deacylation by ABHD17a controls BK channel splice variant activity - McClafferty_2020_J.Biol.Chem_295_16487
Author(s) : McClafferty H , Runciman H , Shipston MJ
Ref : Journal of Biological Chemistry , 295 :16487 , 2020
Abstract : McClafferty_2020_J.Biol.Chem_295_16487
ESTHER : McClafferty_2020_J.Biol.Chem_295_16487
PubMedSearch : McClafferty_2020_J.Biol.Chem_295_16487
PubMedID: 32913120
Gene_locus related to this paper: human-ABHD17A

Title : Systematic Screening of Depalmitoylating Enzymes and Evaluation of Their Activities by the Acyl-PEGyl Exchange Gel-Shift (APEGS) Assay - Kanadome_2019_Methods.Mol.Biol_2009_83
Author(s) : Kanadome T , Yokoi N , Fukata Y , Fukata M
Ref : Methods Mol Biol , 2009 :83 , 2019
Abstract : Kanadome_2019_Methods.Mol.Biol_2009_83
ESTHER : Kanadome_2019_Methods.Mol.Biol_2009_83
PubMedSearch : Kanadome_2019_Methods.Mol.Biol_2009_83
PubMedID: 31152397

Title : Protein depalmitoylases - Won_2018_Crit.Rev.Biochem.Mol.Biol_53_83
Author(s) : Won SJ , Cheung See Kit M , Martin BR
Ref : Crit Rev Biochem Mol Biol , 53 :83 , 2018
Abstract : Won_2018_Crit.Rev.Biochem.Mol.Biol_53_83
ESTHER : Won_2018_Crit.Rev.Biochem.Mol.Biol_53_83
PubMedSearch : Won_2018_Crit.Rev.Biochem.Mol.Biol_53_83
PubMedID: 29239216

Title : Temporal Profiling Establishes a Dynamic S-Palmitoylation Cycle - Won_2018_ACS.Chem.Biol_13_1560
Author(s) : Won SJ , Martin BR
Ref : ACS Chemical Biology , 13 :1560 , 2018
Abstract : Won_2018_ACS.Chem.Biol_13_1560
ESTHER : Won_2018_ACS.Chem.Biol_13_1560
PubMedSearch : Won_2018_ACS.Chem.Biol_13_1560
PubMedID: 29733200

Title : Dynamic Palmitoylation Targets MAP6 to the Axon to Promote Microtubule Stabilization during Neuronal Polarization - Tortosa_2017_Neuron_94_809
Author(s) : Tortosa E , Adolfs Y , Fukata M , Pasterkamp RJ , Kapitein LC , Hoogenraad CC
Ref : Neuron , 94 :809 , 2017
Abstract : Tortosa_2017_Neuron_94_809
ESTHER : Tortosa_2017_Neuron_94_809
PubMedSearch : Tortosa_2017_Neuron_94_809
PubMedID: 28521134
Gene_locus related to this paper: human-ABHD17A , human-ABHD17B , human-ABHD17C

Title : Identification of PSD-95 Depalmitoylating Enzymes - Yokoi_2016_J.Neurosci_36_6431
Author(s) : Yokoi N , Fukata Y , Sekiya A , Murakami T , Kobayashi K , Fukata M
Ref : Journal of Neuroscience , 36 :6431 , 2016
Abstract : Yokoi_2016_J.Neurosci_36_6431
ESTHER : Yokoi_2016_J.Neurosci_36_6431
PubMedSearch : Yokoi_2016_J.Neurosci_36_6431
PubMedID: 27307232
Gene_locus related to this paper: human-ABHD17A , human-ABHD17B , human-ABHD17C , rat-ab17c

Title : ABHD17 proteins are novel protein depalmitoylases that regulate N-Ras palmitate turnover and subcellular localization - Lin_2015_Elife_4_
Author(s) : Lin DT , Conibear E
Ref : Elife , 4 : , 2015
Abstract : Lin_2015_Elife_4_
ESTHER : Lin_2015_Elife_4_
PubMedSearch : Lin_2015_Elife_4_
PubMedID: 26701913
Gene_locus related to this paper: human-ABHD17A , human-ABHD17B , human-ABHD17C

Title : Large-scale profiling of protein palmitoylation in mammalian cells - Martin_2009_Nat.Methods_6_135
Author(s) : Martin BR , Cravatt BF
Ref : Nat Methods , 6 :135 , 2009
Abstract : Martin_2009_Nat.Methods_6_135
ESTHER : Martin_2009_Nat.Methods_6_135
PubMedSearch : Martin_2009_Nat.Methods_6_135
PubMedID: 19137006
Gene_locus related to this paper: human-ABHD17A , human-ABHD17B , human-ABHD17C

No structure scheme yet for this family

Genes Proteins in ABHD17-depalmitoylase family (85)

Fragments of genes in ABHD17-depalmitoylase family (2)

No fragment of genes

Substrates in ABHD17-depalmitoylase family (1)

Inhibitors in ABHD17-depalmitoylase family (10)