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References (10)

Title : Utilization of ferulic acid in Aspergillus niger requires the transcription factor FarA and a newly identified Far-like protein (FarD) that lacks the canonical Zn(II)(2)Cys(6) domain - Arentshorst_2022_Front.Fungal.Biol_3_978845
Author(s) : Arentshorst M , Reijngoud J , van Tol DJC , Reid ID , Arendsen Y , Pel HJ , van Peij N , Visser J , Punt PJ , Tsang A , Ram AFJ
Ref : Front Fungal Biol , 3 :978845 , 2022
Abstract : Arentshorst_2022_Front.Fungal.Biol_3_978845
ESTHER : Arentshorst_2022_Front.Fungal.Biol_3_978845
PubMedSearch : Arentshorst_2022_Front.Fungal.Biol_3_978845
PubMedID: 37746181
Gene_locus related to this paper: aspng-faeb

Title : Screening of novel fungal Carbohydrate Esterase family 1 enzymes identifies three novel dual feruloyl\/acetyl xylan esterases - Dilokpimol_2022_FEBS.Lett__
Author(s) : Dilokpimol A , Verkerk B , Li X , Bellemare A , Lavallee M , Frommhagen M , Normolle Underlin E , Kabel MA , Powlowski J , Tsang A , de Vries RP
Ref : FEBS Letters , : , 2022
Abstract : Dilokpimol_2022_FEBS.Lett__
ESTHER : Dilokpimol_2022_FEBS.Lett__
PubMedSearch : Dilokpimol_2022_FEBS.Lett__
PubMedID: 35187647
Gene_locus related to this paper: emeni-axe1 , aspng-a0a100iph2 , talem-e9m3d1 , myctt-g2qd29 , chatd-g0sbz2 , chatd-g0s216 , mycse-fae1c , mycse-fae1f , mycse-fae1e , mycse-axe1b , mycse-fae4 , acrth-axe1a , chagb-q2gyn8

Title : Economizing the lignocellulosic hydrolysis process using heterologously expressed auxiliary enzymes feruloyl esterase D (CE1) and beta-xylosidase (GH43) derived from thermophilic fungi Scytalidium thermophilum - Agrawal_2021_Bioresour.Technol_339_125603
Author(s) : Agrawal D , Tsang A , Chadha BS
Ref : Bioresour Technol , 339 :125603 , 2021
Abstract : Agrawal_2021_Bioresour.Technol_339_125603
ESTHER : Agrawal_2021_Bioresour.Technol_339_125603
PubMedSearch : Agrawal_2021_Bioresour.Technol_339_125603
PubMedID: 34293687

Title : Loss of function of the carbon catabolite repressor CreA leads to low but inducer-independent expression from the feruloyl esterase B promoter in Aspergillus niger - Reijngoud_2021_Biotechnol.Lett__
Author(s) : Reijngoud J , Arentshorst M , Ruijmbeek C , Reid I , Alazi ED , Punt PJ , Tsang A , Ram AFJ
Ref : Biotechnol Lett , : , 2021
Abstract : Reijngoud_2021_Biotechnol.Lett__
ESTHER : Reijngoud_2021_Biotechnol.Lett__
PubMedSearch : Reijngoud_2021_Biotechnol.Lett__
PubMedID: 33738610

Title : The obligate alkalophilic soda-lake fungus Sodiomyces alkalinus has shifted to a protein diet - Grum-Grzhimaylo_2018_Mol.Ecol_27_4808
Author(s) : Grum-Grzhimaylo AA , Falkoski DL , van den Heuvel J , Valero-Jimenez CA , Min B , Choi IG , Lipzen A , Daum CG , Aanen DK , Tsang A , Henrissat B , Bilanenko EN , de Vries RP , van Kan JAL , Grigoriev IV , Debets AJM
Ref : Mol Ecol , 27 :4808 , 2018
Abstract : Grum-Grzhimaylo_2018_Mol.Ecol_27_4808
ESTHER : Grum-Grzhimaylo_2018_Mol.Ecol_27_4808
PubMedSearch : Grum-Grzhimaylo_2018_Mol.Ecol_27_4808
PubMedID: 30368956
Gene_locus related to this paper: 9pezi-a0a3n2q0e7 , 9pezi-a0a3n2pu70 , 9pezi-a0a3n2puy7

Title : Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus - de Vries_2017_Genome.Biol_18_28
Author(s) : de Vries RP , Riley R , Wiebenga A , Aguilar-Osorio G , Amillis S , Uchima CA , Anderluh G , Asadollahi M , Askin M , Barry K , Battaglia E , Bayram O , Benocci T , Braus-Stromeyer SA , Caldana C , Canovas D , Cerqueira GC , Chen F , Chen W , Choi C , Clum A , Dos Santos RA , Damasio AR , Diallinas G , Emri T , Fekete E , Flipphi M , Freyberg S , Gallo A , Gournas C , Habgood R , Hainaut M , Harispe ML , Henrissat B , Hilden KS , Hope R , Hossain A , Karabika E , Karaffa L , Karanyi Z , Krasevec N , Kuo A , Kusch H , LaButti K , Lagendijk EL , Lapidus A , Levasseur A , Lindquist E , Lipzen A , Logrieco AF , Maccabe A , Makela MR , Malavazi I , Melin P , Meyer V , Mielnichuk N , Miskei M , Molnar AP , Mule G , Ngan CY , Orejas M , Orosz E , Ouedraogo JP , Overkamp KM , Park HS , Perrone G , Piumi F , Punt PJ , Ram AF , Ramon A , Rauscher S , Record E , Riano-Pachon DM , Robert V , Rohrig J , Ruller R , Salamov A , Salih NS , Samson RA , Sandor E , Sanguinetti M , Schutze T , Sepcic K , Shelest E , Sherlock G , Sophianopoulou V , Squina FM , Sun H , Susca A , Todd RB , Tsang A , Unkles SE , van de Wiele N , van Rossen-Uffink D , Oliveira JV , Vesth TC , Visser J , Yu JH , Zhou M , Andersen MR , Archer DB , Baker SE , Benoit I , Brakhage AA , Braus GH , Fischer R , Frisvad JC , Goldman GH , Houbraken J , Oakley B , Pocsi I , Scazzocchio C , Seiboth B , vanKuyk PA , Wortman J , Dyer PS , Grigoriev IV
Ref : Genome Biol , 18 :28 , 2017
Abstract : de Vries_2017_Genome.Biol_18_28
ESTHER : de Vries_2017_Genome.Biol_18_28
PubMedSearch : de Vries_2017_Genome.Biol_18_28
PubMedID: 28196534
Gene_locus related to this paper: asptu-a0a1l9nhd0 , aspve-a0a1l9pxx8 , aspve-a0a1l9q4m3 , aspwe-a0a1l9s133 , 9euro-a0a1l9t3v9 , aspwe-a0a1l9rcx6 , aspna-g3y5a6 , aspgl-a0a1l9v4d3 , 9euro-a0a1l9sa36 , aspsb-a0a319eji6 , aspve-a0a1l9px96 , 9euro-a0a1l9tay1 , aspgl-a0a1l9vbc0 , aspc5-a0a1r3rh65 , 9euro-a0a2v5i956 , aspwe-a0a1l9rpp6 , aspna-g3xpw9 , aspve-a0a1l9plv1 , 9euro-a0a1l9tk47 , aspve-a0a1l9pde9 , aspve-a0a1l9pz72 , aspwe-a0a1l9rde6 , 9euro-a0a1l9tdb5 , aspkw-g7xq95 , aspbc-a0a1l9u6h4 , aspbc-a0a1l9u2l4 , asptc-a0a1l9mx83 , aspgl-a0a1l9ve90 , aspve-a0a1l9pvz9 , 9euro-a0a1l9tdh3 , aspc5-a0a1r3rmn9 , aspwe-a0a1l9rlq2 , asptc-a0a1l9nby7 , aspng-a0a100i8t9 , aspc5-a0a1r3rem6 , aspbc-a0a1l9uy89 , aspa1-anee , aspa1-aneh , aspa1-acrc , aspbc-alba , aspa1-acui

Title : The production and characterization of a new active lipase from Acremonium alcalophilum using a plant bioreactor - Pereira_2013_Biotechnol.Biofuels_6_111
Author(s) : Pereira EO , Tsang A , McAllister TA , Menassa R
Ref : Biotechnol Biofuels , 6 :111 , 2013
Abstract : Pereira_2013_Biotechnol.Biofuels_6_111
ESTHER : Pereira_2013_Biotechnol.Biofuels_6_111
PubMedSearch : Pereira_2013_Biotechnol.Biofuels_6_111
PubMedID: 23915965
Gene_locus related to this paper: sodal-lipa

Title : The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes - Floudas_2012_Science_336_1715
Author(s) : Floudas D , Binder M , Riley R , Barry K , Blanchette RA , Henrissat B , Martinez AT , Otillar R , Spatafora JW , Yadav JS , Aerts A , Benoit I , Boyd A , Carlson A , Copeland A , Coutinho PM , de Vries RP , Ferreira P , Findley K , Foster B , Gaskell J , Glotzer D , Gorecki P , Heitman J , Hesse C , Hori C , Igarashi K , Jurgens JA , Kallen N , Kersten P , Kohler A , Kues U , Kumar TK , Kuo A , LaButti K , Larrondo LF , Lindquist E , Ling A , Lombard V , Lucas S , Lundell T , Martin R , McLaughlin DJ , Morgenstern I , Morin E , Murat C , Nagy LG , Nolan M , Ohm RA , Patyshakuliyeva A , Rokas A , Ruiz-Duenas FJ , Sabat G , Salamov A , Samejima M , Schmutz J , Slot JC , St John F , Stenlid J , Sun H , Sun S , Syed K , Tsang A , Wiebenga A , Young D , Pisabarro A , Eastwood DC , Martin F , Cullen D , Grigoriev IV , Hibbett DS
Ref : Science , 336 :1715 , 2012
Abstract : Floudas_2012_Science_336_1715
ESTHER : Floudas_2012_Science_336_1715
PubMedSearch : Floudas_2012_Science_336_1715
PubMedID: 22745431
Gene_locus related to this paper: aurde-j0d098 , aurde-j0dc31 , glota-s7rlc1 , fompi-s8f7s4 , dacsp-m5fpg2 , dicsq-r7sm16 , dacsp-m5g7q5 , dacsp-m5fr12 , glota-s7q5w3 , fompi-s8f826.1 , fompi-s8f826.2 , dicsq-r7sy09 , glota-s7rt87 , dicsq-r7t032 , glota-s7rym7 , fompi-s8fiv2 , dacsp-m5gda3.2 , dicsq-r7swi6 , dacsp-m5frf2 , fompi-s8ebb6 , dicsq-r7sln3 , dicsq-r7sya6 , dacsp-m5g7g1 , dicsq-r7syx7 , dicsq-r7sx57 , dacsp-m5fps7 , glota-s7pwi7 , dicsq-r7swj6 , fompi-s8ejq6 , dicsq-r7spc3 , glota-s7q258 , dacsp-m5ft65 , glota-s7q3m7 , fompi-s8dkc7 , glota-s7q1z1 , fompi-s8eqi2 , glota-s7q1z8 , fompi-s8du50 , dacsp-m5gg33 , dacsp-m5g3a7 , fompi-s8ecd7 , fompi-s8dps1 , dacsp-m5fwr0 , dicsq-r7sub7 , glota-s7q8k9 , fompi-s8ffc3 , dacsp-m5g2f9 , fompi-s8ecc2 , dacsp-m5g868 , fompi-s8f890 , dicsq-r7t1a8 , fompi-s8ebx4 , fompi-s8eb97 , glota-s7q222 , glota-s7puf0 , fompi-s8f6v9 , dacsp-m5g0z2 , dacsp-m5gdh9 , fompi-s8fb37 , dacsp-m5fy91 , glota-s7q5v6 , fompi-s8fl44 , dicsq-r7stv9 , dicsq-r7szk3 , fompi-s8epq9 , glota-s7rh56 , dacsp-m5gbt1 , punst-r7s3x9 , punst-r7s0t5 , glota-s7q312 , glota-s7rhh6 , dicsq-r7t117 , dicsq-r7slz3

Title : Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris - Berka_2011_Nat.Biotechnol_29_922
Author(s) : Berka RM , Grigoriev IV , Otillar R , Salamov A , Grimwood J , Reid I , Ishmael N , John T , Darmond C , Moisan MC , Henrissat B , Coutinho PM , Lombard V , Natvig DO , Lindquist E , Schmutz J , Lucas S , Harris P , Powlowski J , Bellemare A , Taylor D , Butler G , de Vries RP , Allijn IE , van den Brink J , Ushinsky S , Storms R , Powell AJ , Paulsen IT , Elbourne LD , Baker SE , Magnuson J , Laboissiere S , Clutterbuck AJ , Martinez D , Wogulis M , de Leon AL , Rey MW , Tsang A
Ref : Nat Biotechnol , 29 :922 , 2011
Abstract : Berka_2011_Nat.Biotechnol_29_922
ESTHER : Berka_2011_Nat.Biotechnol_29_922
PubMedSearch : Berka_2011_Nat.Biotechnol_29_922
PubMedID: 21964414
Gene_locus related to this paper: thiha-cip2 , thite-g2r8b5 , thite-g2rcm8 , thite-g2r192 , thiha-g2qdy2 , thiha-g2qh51 , thite-g2rae6 , thite-g2r5h0 , thiha-g2qj94 , thiha-g2qnb2 , thite-g2rg14 , myctt-g2q973 , thite-g2qtu3 , myctt-g2qpr0 , thite-g2rhm0 , 9pezi-a0a3s4b069 , myctt-g2qmb4 , thett-g2qur2

Title : Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88 - Andersen_2011_Genome.Res_21_885
Author(s) : Andersen MR , Salazar MP , Schaap PJ , van de Vondervoort PJ , Culley D , Thykaer J , Frisvad JC , Nielsen KF , Albang R , Albermann K , Berka RM , Braus GH , Braus-Stromeyer SA , Corrochano LM , Dai Z , van Dijck PW , Hofmann G , Lasure LL , Magnuson JK , Menke H , Meijer M , Meijer SL , Nielsen JB , Nielsen ML , van Ooyen AJ , Pel HJ , Poulsen L , Samson RA , Stam H , Tsang A , van den Brink JM , Atkins A , Aerts A , Shapiro H , Pangilinan J , Salamov A , Lou Y , Lindquist E , Lucas S , Grimwood J , Grigoriev IV , Kubicek CP , Martinez D , van Peij NN , Roubos JA , Nielsen J , Baker SE
Ref : Genome Res , 21 :885 , 2011
Abstract : Andersen_2011_Genome.Res_21_885
ESTHER : Andersen_2011_Genome.Res_21_885
PubMedSearch : Andersen_2011_Genome.Res_21_885
PubMedID: 21543515
Gene_locus related to this paper: aspna-g3y4g9 , aspna-g3yal2 , aspna-g3ycq2 , aspnc-a2qbh3 , aspnc-a2qe77 , aspnc-a2qf54 , aspnc-a2qfe9 , aspnc-a2qg33 , aspnc-a2qh76 , aspnc-a2qhe2 , aspnc-a2qi32 , aspnc-a2ql89 , aspnc-a2ql90 , aspnc-a2qla0 , aspnc-a2qmk5 , aspnc-a2qn56 , aspnc-a2qs22 , aspnc-a2qti9 , aspnc-a2qtz0 , aspnc-a2quc1 , aspnc-a2qx92 , aspnc-a2qyf0 , aspnc-a2qys7 , aspnc-a2qz72 , aspnc-a2qzn6 , aspnc-a2qzr0 , aspnc-a2qzx0 , aspnc-a2qzx4 , aspnc-a2r0p4 , aspnc-a2r1r5 , aspnc-a2r2i5 , aspnc-a2r5r4 , aspnc-a2r6h5 , aspnc-a2r8r3 , aspnc-a2r8z3 , aspnc-a2r273 , aspnc-a2r496 , aspnc-a2r502 , aspnc-a5abe5 , aspnc-a5abe8 , aspnc-a5abh9 , aspnc-a5abk1 , aspnc-axe1 , aspnc-cuti1 , aspnc-cuti2 , aspng-a2qs46 , aspng-a2qv27 , aspni-EstA , aspkw-g7y0v7 , aspnc-a2qt47 , aspnc-a2qt66 , aspna-g3xpq9 , aspnc-a2qqa1 , aspna-g3xsl3 , aspna-g3y5a6 , aspna-g3xpw9 , aspaw-a0a401kpx5 , aspnc-a2qw57 , aspaw-a0a401kcz4 , aspna-alba , aspna-azac