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Title : Comprehensive genomic and transcriptomic analysis of polycyclic aromatic hydrocarbon degradation by a mycoremediation fungus, Dentipellis sp. KUC8613 - Park_2019_Appl.Microbiol.Biotechnol_103_8145 |
Author(s) : Park H , Min B , Jang Y , Kim J , Lipzen A , Sharma A , Andreopoulos B , Johnson J , Riley R , Spatafora JW , Henrissat B , Kim KH , Grigoriev IV , Kim JJ , Choi IG |
Ref : Applied Microbiology & Biotechnology , 103 :8145 , 2019 |
Abstract : Park_2019_Appl.Microbiol.Biotechnol_103_8145 |
ESTHER : Park_2019_Appl.Microbiol.Biotechnol_103_8145 |
PubMedSearch : Park_2019_Appl.Microbiol.Biotechnol_103_8145 |
PubMedID: 31482283 |
Gene_locus related to this paper: 9agam-a0a5b1qnb8 , 9agam-a0a5b1qwq3 , 9agam-a0a5b1qh04 , 9agam-a0a5b1qyk1 , 9agam-a0a5b1qmi3 , 9agam-a0a5b1qi91 , 9agam-a0a5b1qhi2 |
Title : Genomics and Development of Lentinus tigrinus: A White-Rot Wood-Decaying Mushroom with Dimorphic Fruiting Bodies - Wu_2018_Genome.Biol.Evol_10_3250 |
Author(s) : Wu B , Xu Z , Knudson A , Carlson A , Chen N , Kovaka S , LaButti K , Lipzen A , Pennachio C , Riley R , Schakwitz W , Umezawa K , Ohm RA , Grigoriev IV , Nagy LG , Gibbons J , Hibbett D |
Ref : Genome Biol Evol , 10 :3250 , 2018 |
Abstract : Wu_2018_Genome.Biol.Evol_10_3250 |
ESTHER : Wu_2018_Genome.Biol.Evol_10_3250 |
PubMedSearch : Wu_2018_Genome.Biol.Evol_10_3250 |
PubMedID: 30398645 |
Gene_locus related to this paper: 9aphy-a0a5c2t2q2 |
Title : Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass - Miyauchi_2018_Biotechnol.Biofuels_11_201 |
Author(s) : Miyauchi S , Rancon A , Drula E , Hage H , Chaduli D , Favel A , Grisel S , Henrissat B , Herpoel-Gimbert I , Ruiz-Duenas FJ , Chevret D , Hainaut M , Lin J , Wang M , Pangilinan J , Lipzen A , Lesage-Meessen L , Navarro D , Riley R , Grigoriev IV , Zhou S , Raouche S , Rosso MN |
Ref : Biotechnol Biofuels , 11 :201 , 2018 |
Abstract : Miyauchi_2018_Biotechnol.Biofuels_11_201 |
ESTHER : Miyauchi_2018_Biotechnol.Biofuels_11_201 |
PubMedSearch : Miyauchi_2018_Biotechnol.Biofuels_11_201 |
PubMedID: 30061923 |
Gene_locus related to this paper: 9aphy-a0a371d1b5 , 9aphy-a0a371dju9 |
Title : Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria - Sipos_2017_Nat.Ecol.Evol_1_1931 |
Author(s) : Sipos G , Prasanna AN , Walter MC , O'Connor E , Balint B , Krizsan K , Kiss B , Hess J , Varga T , Slot J , Riley R , Boka B , Rigling D , Barry K , Lee J , Mihaltcheva S , LaButti K , Lipzen A , Waldron R , Moloney NM , Sperisen C , Kredics L , Vagvolgyi C , Patrignani A , Fitzpatrick D , Nagy I , Doyle S , Anderson JB , Grigoriev IV , Guldener U , Munsterkotter M , Nagy LG |
Ref : Nat Ecol Evol , 1 :1931 , 2017 |
Abstract : Sipos_2017_Nat.Ecol.Evol_1_1931 |
ESTHER : Sipos_2017_Nat.Ecol.Evol_1_1931 |
PubMedSearch : Sipos_2017_Nat.Ecol.Evol_1_1931 |
PubMedID: 29085064 |
Gene_locus related to this paper: armos-armb |
Title : The genome of Xylona heveae provides a window into fungal endophytism - Gazis_2016_Fungal.Biol_120_26 |
Author(s) : Gazis R , Kuo A , Riley R , LaButti K , Lipzen A , Lin J , Amirebrahimi M , Hesse CN , Spatafora JW , Henrissat B , Hainaut M , Grigoriev IV , Hibbett DS |
Ref : Fungal Biol , 120 :26 , 2016 |
Abstract : Gazis_2016_Fungal.Biol_120_26 |
ESTHER : Gazis_2016_Fungal.Biol_120_26 |
PubMedSearch : Gazis_2016_Fungal.Biol_120_26 |
PubMedID: 26693682 |
Gene_locus related to this paper: 9pezi-a0a165f9w1 , 9pezi-a0a165fsb2 , 9pezi-a0a165gpf2 , 9pezi-a0a164zp96 , xylht-a0a165aju9 , xylht-a0a165jye6 , xylht-a0a165jir4 |
Title : Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus - Couturier_2015_Biotechnol.Biofuels_8_216 |
Author(s) : Couturier M , Navarro D , Chevret D , Henrissat B , Piumi F , Ruiz-Duenas FJ , Martinez AT , Grigoriev IV , Riley R , Lipzen A , Berrin JG , Master ER , Rosso MN |
Ref : Biotechnol Biofuels , 8 :216 , 2015 |
Abstract : Couturier_2015_Biotechnol.Biofuels_8_216 |
ESTHER : Couturier_2015_Biotechnol.Biofuels_8_216 |
PubMedSearch : Couturier_2015_Biotechnol.Biofuels_8_216 |
PubMedID: 26692083 |
Gene_locus related to this paper: pycco-a0a1y2inc6 , pycco-a0a1y2ib15 , pycco-a0a1y2j2i8 , pycco-a0a1y2i5q8 , pycco-a0a1y2ib37 |
Title : Genomic adaptations of the halophilic Dead Sea filamentous fungus Eurotium rubrum - Kis-Papo_2014_Nat.Commun_5_3745 |
Author(s) : Kis-Papo T , Weig AR , Riley R , Persoh D , Salamov A , Sun H , Lipzen A , Wasser SP , Rambold G , Grigoriev IV , Nevo E |
Ref : Nat Commun , 5 :3745 , 2014 |
Abstract : Kis-Papo_2014_Nat.Commun_5_3745 |
ESTHER : Kis-Papo_2014_Nat.Commun_5_3745 |
PubMedSearch : Kis-Papo_2014_Nat.Commun_5_3745 |
PubMedID: 24811710 |
Gene_locus related to this paper: 9euro-a0a017sa42 , 9euro-a0a017s0c9 , 9euro-a0a017s186 , 9euro-a0a017s8c9 , 9euro-a0a017s6r6 |
Title : The genome of the xerotolerant mold Wallemia sebi reveals adaptations to osmotic stress and suggests cryptic sexual reproduction - Padamsee_2012_Fungal.Genet.Biol_49_217 |
Author(s) : Padamsee M , Kumar TK , Riley R , Binder M , Boyd A , Calvo AM , Furukawa K , Hesse C , Hohmann S , James TY , LaButti K , Lapidus A , Lindquist E , Lucas S , Miller K , Shantappa S , Grigoriev IV , Hibbett DS , McLaughlin DJ , Spatafora JW , Aime MC |
Ref : Fungal Genet Biol , 49 :217 , 2012 |
Abstract : Padamsee_2012_Fungal.Genet.Biol_49_217 |
ESTHER : Padamsee_2012_Fungal.Genet.Biol_49_217 |
PubMedSearch : Padamsee_2012_Fungal.Genet.Biol_49_217 |
PubMedID: 22326418 |
Gene_locus related to this paper: walsc-i4y6w1 , walmc-i4y5m3 |
Title : Massive changes in genome architecture accompany the transition to self-fertility in the filamentous fungus Neurospora tetrasperma - Ellison_2011_Genetics_189_55 |
Author(s) : Ellison CE , Stajich JE , Jacobson DJ , Natvig DO , Lapidus A , Foster B , Aerts A , Riley R , Lindquist EA , Grigoriev IV , Taylor JW |
Ref : Genetics , 189 :55 , 2011 |
Abstract : Ellison_2011_Genetics_189_55 |
ESTHER : Ellison_2011_Genetics_189_55 |
PubMedSearch : Ellison_2011_Genetics_189_55 |
PubMedID: 21750257 |
Gene_locus related to this paper: neucr-90C4.300 , neucr-B19A17.360 , neucr-B23G1.090 , neucr-NCU00292.1 , neucr-NCU02679.1 , neucr-NCU04930.1 , neucr-NCU06573.1 , neucr-NCU08752.1 , neucr-NCU09575.1 , neucr-NCU10022.1 , neucr-q7s1x0 , neucr-q7s216 , neucr-q7s259 , neucr-q7s260 , neucr-q7scr4 , neut8-f8n463 , neut9-g4uk39 , neucr-f5hbr2 , neut8-f8mcp7 , neucr-q7ry64 , neucr-FAED , neut8-f8mrh8 |