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Author Report for: Ding Y

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    Title: Heterologous Production of the C33-C45 Polyketide Fragment of Anticancer Apratoxins in a Cyanobacterial Host
    Dhakal D, Kallifidas D, Chen M, Kokkaliari S, Chen QY, Paul VJ, Ding Y, Luesch H
    Ref: Org Lett, 25:2238, 2023 : PubMed


    Title: Genome-wide exploration of the GDSL-type esterase/lipase gene family in rapeseed reveals several BnGELP proteins active during early seedling development
    Ding Y, Xing L, Xu J, Jiang T, Tang X, Wang Y, Huang S, Hao W, Zhou X and Xie CG <1 more author(s)>
    Ref: Front Plant Sci, 14:1139972, 2023 : PubMed


    Title: Maize resistance to witchweed through changes in strigolactone biosynthesis
    Li C, Dong L, Durairaj J, Guan JC, Yoshimura M, Quinodoz P, Horber R, Gaus K, Li J and Bouwmeester HJ <21 more author(s)>
    Ref: Science, 379:94, 2023 : PubMed


    Title: Mechanism and Structural Insights Into a Novel Esterase, E53, Isolated From Erythrobacter longus
    Ding Y, Nie L, Yang XC, Li Y, Huo YY, Li Z, Gao Y, Cui HL, Li J, Xu XW
    Ref: Front Microbiol, 12:798194, 2022 : PubMed


    Title: Esterase-Activated Precipitating Strategy to Achieve Highly Specific Detection and Long-Term Imaging of Calcium Ions by Aggregation-Induced Phosphorescence Probe
    Wang Z, Xiong Z, Liu W, Zhu Q, Zhang X, Ding Y, Huang C, Feng H, Zhang K and Qian Z <1 more author(s)>
    Ref: Analytical Chemistry, :, 2022 : PubMed


    Title: ((E)-N-(4-(((2-Amino-5-phenylpyridin-3-yl)imino)methyl)pyridin-2-yl)cyclopropanecarboxamide) Ameliorated Abeta(1-42)-Induced Alzheimer's Disease in SD Rats by Inhibiting Oxidative Stress and Apoptosis
    Ding Y, Wang X, Ji J, Zhang X, Chen M, Li S, Zhang Q, Liu P
    Ref: ACS Chem Neurosci, :, 2021 : PubMed


    Title: Discovery of soluble epoxide hydrolase inhibitors through DNA-encoded library technology (ELT)
    Ding Y, Belyanskaya S, DeLorey JL, Messer JA, Joseph Franklin G, Centrella PA, Morgan BA, Clark MA, Skinner SR and Israel DI <3 more author(s)>
    Ref: Bioorganic & Medicinal Chemistry, 41:116216, 2021 : PubMed


    Title: Identifying genes for resistant starch, slowly digestible starch, and rapidly digestible starch in rice using genome-wide association studies
    Zhang N, Wang M, Fu J, Shen Y, Ding Y, Wu D, Shu X, Song W
    Ref: Genes Genomics, 42:1227, 2020 : PubMed


    Title: Design, synthesis and evaluation of novel ferulic acid derivatives as multi-target-directed ligands for the treatment of Alzheimer's disease
    Lan JS, Zeng RF, Jiang XY, Hou JW, Liu Y, Hu ZH, Li HX, Li Y, Xie SS and Zhang T <1 more author(s)>
    Ref: Bioorg Chem, :103413, 2019 : PubMed


    Title: Thermostability of Lipase A and Dynamic Communication Based on Residue Interaction Network
    Xia Q, Ding Y
    Ref: Protein Pept Lett, 26:702, 2019 : PubMed


    Title: Reassembly of native components with donepezil to execute dual-missions in Alzheimer's disease therapy
    Zhang H, Zhao Y, Yu M, Zhao Z, Liu P, Cheng H, Ji Y, Jin Y, Sun B and Ding Y <1 more author(s)>
    Ref: J Control Release, 296:14, 2019 : PubMed


    Title: Excipient-free nanodispersion of 7-ethyl-10-hydroxycamptothecin exerts potent therapeutic effects against pancreatic cancer cell lines and patient-derived xenografts
    Zhang L, Zhou J, Yan Y, Zhou X, Zhou Q, Du R, Hu S, Ge W, Huang Y and Wang W <5 more author(s)>
    Ref: Cancer Letters, 465:36, 2019 : PubMed


    Title: Safety, efficacy, and pharmacokinetics of pradefovir for the treatment of chronic hepatitis B infection
    Zhang H, Liu J, Zhu X, Li X, Jin W, Chen H, Wu M, Li C, Liu C and Ding Y <1 more author(s)>
    Ref: Antiviral Res, :104693, 2019 : PubMed


    Title: Long noncoding RNA ABHD11-AS1 functions as a competing endogenous RNA to regulate papillary thyroid cancer progression by miR-199a-5p/SLC1A5 axis
    Zhuang X, Tong H, Ding Y, Wu L, Cai J, Si Y, Zhang H, Shen M
    Ref: Cell Death Dis, 10:620, 2019 : PubMed


    Title: A pH responsive AIE probe for enzyme assays
    Shi L, Liu Y, Wang Q, Wang T, Ding Y, Cao Y, Li Z, Wei H
    Ref: Analyst, 143:741, 2018 : PubMed


    Title: Discovering Drugs with DNA-Encoded Library Technology: From Concept to Clinic with an Inhibitor of Soluble Epoxide Hydrolase
    Belyanskaya SL, Ding Y, Callahan JF, Lazaar AL, Israel DI
    Ref: Chembiochem, 18:837, 2017 : PubMed


    Title: Design, synthesis and biological activity of novel donepezil derivatives bearing N-benzyl pyridinium moiety as potent and dual binding site acetylcholinesterase inhibitors
    Lan JS, Zhang T, Liu Y, Yang J, Xie SS, Liu J, Miao ZY, Ding Y
    Ref: Eur Journal of Medicinal Chemistry, 133:184, 2017 : PubMed


    Title: Design, synthesis and evaluation of novel cinnamic acid derivatives bearing N-benzyl pyridinium moiety as multifunctional cholinesterase inhibitors for Alzheimer's disease
    Lan JS, Hou JW, Liu Y, Ding Y, Zhang Y, Li L, Zhang T
    Ref: J Enzyme Inhib Med Chem, 32:776, 2017 : PubMed


    Title: Design, synthesis and biological evaluation of novel coumarin-N-benzyl pyridinium hybrids as multi-target agents for the treatment of Alzheimer's disease
    Lan JS, Ding Y, Liu Y, Kang P, Hou JW, Zhang XY, Xie SS, Zhang T
    Ref: Eur Journal of Medicinal Chemistry, 139:48, 2017 : PubMed


    Title: The Relation Between Lipase Thermostability and Dynamics of Hydrogen Bond and Hydrogen Bond Network Based on Long Time Molecular Dynamics Simulation
    Zhang L, Ding Y
    Ref: Protein Pept Lett, 24:643, 2017 : PubMed


    Title: Does cadmium affect the toxicokinetics of permethrin in Chironomus dilutus at sublethal level? Evidence of enzymatic activity and gene expression
    Chen X, Li H, Zhang J, Ding Y, You J
    Ref: Environ Pollut, 218:1005, 2016 : PubMed


    Title: Genome sequencing of the perciform fish Larimichthys crocea provides insights into molecular and genetic mechanisms of stress adaptation
    Ao J, Mu Y, Xiang LX, Fan D, Feng M, Zhang S, Shi Q, Zhu LY, Li T and Chen X <19 more author(s)>
    Ref: PLoS Genet, 11:e1005118, 2015 : PubMed


    Title: Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies
    Li X, Fan D, Zhang W, Liu G, Zhang L, Zhao L, Fang X, Chen L, Dong Y and Wang W <14 more author(s)>
    Ref: Nat Commun, 6:8212, 2015 : PubMed


    Title: Polycyclic Polyprenylated Acylphloroglucinol Congeners Possessing Diverse Structures from Hypericum henryi
    Yang XW, Li MM, Liu X, Ferreira D, Ding Y, Zhang JJ, Liao Y, Qin HB, Xu G
    Ref: Journal of Natural Products, 78:885, 2015 : PubMed


    Title: Tacrine induces apoptosis through lysosome- and mitochondria-dependent pathway in HepG2 cells
    Gao C, Ding Y, Zhong L, Jiang L, Geng C, Yao X, Cao J
    Ref: Toxicol In Vitro, 28:667, 2014 : PubMed


    Title: Droplet-based microfluidics for dose-response assay of enzyme inhibitors by electrochemical method
    Gu S, Lu Y, Ding Y, Li L, Zhang F, Wu Q
    Ref: Anal Chim Acta, 796:68, 2013 : PubMed


    Title: In vitro and in vivo characterization of a novel soluble epoxide hydrolase inhibitor
    Podolin PL, Bolognese BJ, Foley JF, Long E, 3rd, Peck B, Umbrecht S, Zhang X, Zhu P, Schwartz B and Callahan JF <16 more author(s)>
    Ref: Prostaglandins Other Lipid Mediat, 104-105:25, 2013 : PubMed


    Title: First case of E anophelis outbreak in an intensive-care unit
    Teo J, Tan SY, Tay M, Ding Y, Kjelleberg S, Givskov M, Lin RT, Yang L
    Ref: Lancet, 382:855, 2013 : PubMed


    Title: Discovery of 1-(1,3,5-triazin-2-yl)piperidine-4-carboxamides as inhibitors of soluble epoxide hydrolase
    Thalji RK, McAtee JJ, Belyanskaya S, Brandt M, Brown GD, Costell MH, Ding Y, Dodson JW, Eisennagel SH and Marino JP, Jr. <18 more author(s)>
    Ref: Bioorganic & Medicinal Chemistry Lett, 23:3584, 2013 : PubMed


    Title: The clinical study of precise hemihepatectomy guided by middle hepatic vein
    Qiu Y, Zhu X, Zhu R, Zhou J, Zhou T, Wang Y, Ding Y
    Ref: World J Surg, 36:2428, 2012 : PubMed


    Title: Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity
    Ma M, Wang C, Ding Y, Li L, Shen D, Jiang X, Guan D, Cao F, Chen H and Du B <7 more author(s)>
    Ref: Journal of Bacteriology, 193:311, 2011 : PubMed


    Title: Biodiesel production in packed-bed reactors using lipase-nanoparticle biocomposite
    Wang X, Liu X, Zhao C, Ding Y, Xu P
    Ref: Bioresour Technol, 102:6352, 2011 : PubMed


    Title: Moving posttranslational modifications forward to biosynthesize the glycosylated thiopeptide nocathiacin I in Nocardia sp. ATCC202099
    Ding Y, Yu Y, Pan H, Guo H, Li Y, Liu W
    Ref: Mol Biosyst, 6:1180, 2010 : PubMed


    Title: A catalog of reference genomes from the human microbiome
    Nelson KE, Weinstock GM, Highlander SK, Worley KC, Creasy HH, Wortman JR, Rusch DB, Mitreva M, Sodergren E and Zhu D <73 more author(s)>
    Ref: Science, 328:994, 2010 : PubMed


    Title: Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential
    Yeoman CJ, Yildirim S, Thomas SM, Durkin AS, Torralba M, Sutton G, Buhay CJ, Ding Y, Dugan-Rocha SP and Wilson BA <8 more author(s)>
    Ref: PLoS ONE, 5:e12411, 2010 : PubMed


    Title: The genome sequence of taurine cattle: a window to ruminant biology and evolution
    Elsik CG, Tellam RL, Worley KC, Gibbs RA, Muzny DM, Weinstock GM, Adelson DL, Eichler EE, Elnitski L and Zhao FQ <297 more author(s)>
    Ref: Science, 324:522, 2009 : PubMed


    Title: Thiopeptide biosynthesis featuring ribosomally synthesized precursor peptides and conserved posttranslational modifications
    Liao R, Duan L, Lei C, Pan H, Ding Y, Zhang Q, Chen D, Shen B, Yu Y, Liu W
    Ref: Chemical Biology, 16:141, 2009 : PubMed


    Title: Nosiheptide biosynthesis featuring a unique indole side ring formation on the characteristic thiopeptide framework
    Yu Y, Duan L, Zhang Q, Liao R, Ding Y, Pan H, Wendt-Pienkowski E, Tang G, Shen B, Liu W
    Ref: ACS Chemical Biology, 4:855, 2009 : PubMed


    Title: Large scale variation in Enterococcus faecalis illustrated by the genome analysis of strain OG1RF
    Bourgogne A, Garsin DA, Qin X, Singh KV, Sillanpaa J, Yerrapragada S, Ding Y, Dugan-Rocha S, Buhay C and Weinstock GM <18 more author(s)>
    Ref: Genome Biol, 9:R110, 2008 : PubMed


    Title: A mutation upstream of an ATPase gene significantly increases magnetosome production in Magnetospirillum gryphiswaldense
    Liu J, Ding Y, Jiang W, Tian J, Li Y, Li J
    Ref: Applied Microbiology & Biotechnology, 81:551, 2008 : PubMed


    Title: Evolutionary and biomedical insights from the rhesus macaque genome
    Gibbs RA, Rogers J, Katze MG, Bumgarner R, Weinstock GM, Mardis ER, Remington KA, Strausberg RL, Venter JC and Zwieg AS <166 more author(s)>
    Ref: Science, 316:222, 2007 : PubMed


    Title: Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032
    Gioia J, Yerrapragada S, Qin X, Jiang H, Igboeli OC, Muzny D, Dugan-Rocha S, Ding Y, Hawes A and Weinstock GM <31 more author(s)>
    Ref: PLoS ONE, 2:e928, 2007 : PubMed


    Title: Subtle genetic changes enhance virulence of methicillin resistant and sensitive Staphylococcus aureus
    Highlander SK, Hulten KG, Qin X, Jiang H, Yerrapragada S, Mason EO, Jr., Shang Y, Williams TM, Fortunov RM and Weinstock GM <23 more author(s)>
    Ref: BMC Microbiol, 7:99, 2007 : PubMed


    Title: The DNA sequence, annotation and analysis of human chromosome 3
    Muzny DM, Scherer SE, Kaul R, Wang J, Yu J, Sudbrak R, Buhay CJ, Chen R, Cree A and Gibbs RA <100 more author(s)>
    Ref: Nature, 440:1194, 2006 : PubMed


    Title: The DNA sequence of the human X chromosome
    Ross MT, Grafham DV, Coffey AJ, Scherer S, McLay K, Muzny D, Platzer M, Howell GR, Burrows C and Bentley DR <272 more author(s)>
    Ref: Nature, 434:325, 2005 : PubMed


    Title: Crystallization and preliminary crystallographic analysis of acylamino-acid releasing enzyme from the hyperthermophilic archaeon Aeropyrum pernix
    Wang G, Gao R, Ding Y, Yang H, Cao S, Feng Y, Rao Z
    Ref: Acta Crystallographica D Biol Crystallogr, 58:1054, 2002 : PubMed


    Title: Large-scale concatenation cDNA sequencing
    Yu W, Andersson B, Worley KC, Muzny DM, Ding Y, Liu W, Ricafrente JY, Wentland MA, Lennon G, Gibbs RA
    Ref: Genome Res, 7:353, 1997 : PubMed


    Title: Clinical observation and comparison of the effectiveness of several oxime cholinesterase reactivators
    Xue SZ, Ding XJ, Ding Y
    Ref: Scandinavian Journal of Work, Environment & Health, 4:46, 1985 : PubMed


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