Report for Barron A

Title : The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli - Petty_2010_J.Bacteriol_192_525

Author(s) : Petty NK , Bulgin R , Crepin VF , Cerdeno-Tarraga AM , Schroeder GN , Quail MA , Lennard N , Corton C , Barron A , Clark L , Toribio AL , Parkhill J , Dougan G , Frankel G , Thomson NR

Ref : Journal of Bacteriology , 192 :525 , 2010

Abstract : Petty_2010_J.Bacteriol_192_525

ESTHER : Petty_2010_J.Bacteriol_192_525

PubMedSearch : Petty_2010_J.Bacteriol_192_525

PubMedID: 19897651

Gene_locus related to this paper: citk8-bioh , citk8-y1948 , citri-d2th08 , citri-d2tjf8 , citri-d2tjy8 , citri-d2tk80 , citri-d2tmm5 , citri-d2tmq5 , citri-d2tri3 , citri-d2trm8

Title : Evidence for niche adaptation in the genome of the bovine pathogen Streptococcus uberis - Ward_2009_BMC.Genomics_10_54

Author(s) : Ward PN , Holden MT , Leigh JA , Lennard N , Bignell A , Barron A , Clark L , Quail MA , Woodward J , Barrell BG , Egan SA , Field TR , Maskell D , Kehoe M , Dowson CG , Chanter N , Whatmore AM , Bentley SD , Parkhill J

Ref : BMC Genomics , 10 :54 , 2009

Abstract : Ward_2009_BMC.Genomics_10_54

ESTHER : Ward_2009_BMC.Genomics_10_54

PubMedSearch : Ward_2009_BMC.Genomics_10_54

PubMedID: 19175920

Gene_locus related to this paper: stru0-b9drp1 , stru0-b9dsd7 , stru0-b9dum0 , stru0-b9dvu1 , stru0-pepx

Title : Co-evolution of genomes and plasmids within Chlamydia trachomatis and the emergence in Sweden of a new variant strain - Seth-Smith_2009_BMC.Genomics_10_239

Author(s) : Seth-Smith HM , Harris SR , Persson K , Marsh P , Barron A , Bignell A , Bjartling C , Clark L , Cutcliffe LT , Lambden PR , Lennard N , Lockey SJ , Quail MA , Salim O , Skilton RJ , Wang Y , Holland MJ , Parkhill J , Thomson NR , Clarke IN

Ref : BMC Genomics , 10 :239 , 2009

Abstract : Seth-Smith_2009_BMC.Genomics_10_239

ESTHER : Seth-Smith_2009_BMC.Genomics_10_239

PubMedSearch : Seth-Smith_2009_BMC.Genomics_10_239

PubMedID: 19460133

Gene_locus related to this paper: chltr-CT073 , chltr-CT136

Title : Comparative genomics of the emerging human pathogen Photorhabdus asymbiotica with the insect pathogen Photorhabdus luminescens - Wilkinson_2009_BMC.Genomics_10_302

Author(s) : Wilkinson P , Waterfield NR , Crossman L , Corton C , Sanchez-Contreras M , Vlisidou I , Barron A , Bignell A , Clark L , Ormond D , Mayho M , Bason N , Smith F , Simmonds M , Churcher C , Harris D , Thompson NR , Quail M , Parkhill J , ffrench-Constant RH

Ref : BMC Genomics , 10 :302 , 2009

Abstract : Wilkinson_2009_BMC.Genomics_10_302

ESTHER : Wilkinson_2009_BMC.Genomics_10_302

PubMedSearch : Wilkinson_2009_BMC.Genomics_10_302

PubMedID: 19583835

Gene_locus related to this paper: phoaa-b6vks1 , phoaa-b6vmd3 , phoaa-c7bgr2 , phoaa-c7bhw5 , phoaa-c7bjq6 , phoaa-c7bk59 , phoaa-c7bnd9 , pholu-lxd2 , pholu-PLU2437 , phoaa-c7bh14 , phoaa-c7bkb9

Title : Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287\/91 provides insights into evolutionary and host adaptation pathways - Thomson_2008_Genome.Res_18_1624

Author(s) : Thomson NR , Clayton DJ , Windhorst D , Vernikos G , Davidson S , Churcher C , Quail MA , Stevens M , Jones MA , Watson M , Barron A , Layton A , Pickard D , Kingsley RA , Bignell A , Clark L , Harris B , Ormond D , Abdellah Z , Brooks K , Cherevach I , Chillingworth T , Woodward J , Norberczak H , Lord A , Arrowsmith C , Jagels K , Moule S , Mungall K , Sanders M , Whitehead S , Chabalgoity JA , Maskell D , Humphrey T , Roberts M , Barrow PA , Dougan G , Parkhill J

Ref : Genome Res , 18 :1624 , 2008

Abstract : Thomson_2008_Genome.Res_18_1624

ESTHER : Thomson_2008_Genome.Res_18_1624

PubMedSearch : Thomson_2008_Genome.Res_18_1624

PubMedID: 18583645

Gene_locus related to this paper: salen-OPDB , salti-q8z717 , salty-AES , salty-BIOH , salty-DLHH , salty-ENTF , salty-FES , salty-IROD , salty-IROE , salty-P74847 , salty-PLDB , salty-STM0332 , salty-STM4506 , salty-STY1441 , salty-STY2428 , salty-STY3846 , salty-yafa , salty-YBFF , salty-ycfp , salty-YFBB , salty-YHET , salty-YQIA

Title : Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation - Bentley_2008_J.Bacteriol_190_2150

Author(s) : Bentley SD , Corton C , Brown SE , Barron A , Clark L , Doggett J , Harris B , Ormond D , Quail MA , May G , Francis D , Knudson D , Parkhill J , Ishimaru CA

Ref : Journal of Bacteriology , 190 :2150 , 2008

Abstract : Bentley_2008_J.Bacteriol_190_2150

ESTHER : Bentley_2008_J.Bacteriol_190_2150

PubMedSearch : Bentley_2008_J.Bacteriol_190_2150

PubMedID: 18192393

Gene_locus related to this paper: clam3-a5cqb1 , clam3-a5crq6 , clam3-a5csc5 , clam3-a5css8 , clams-b0rcr0 , clams-b0rdd6 , clams-b0rdd7 , clams-b0rde2 , clams-b0rde3 , clams-b0rer7 , clams-b0rga8 , clams-b0riv5 , clam3-a5cp43 , clam3-a5cp56

Title : Extensive DNA inversions in the B. fragilis genome control variable gene expression - Cerdeno-Tarraga_2005_Science_307_1463

Author(s) : Cerdeno-Tarraga AM , Patrick S , Crossman LC , Blakely G , Abratt V , Lennard N , Poxton I , Duerden B , Harris B , Quail MA , Barron A , Clark L , Corton C , Doggett J , Holden MT , Larke N , Line A , Lord A , Norbertczak H , Ormond D , Price C , Rabbinowitsch E , Woodward J , Barrell B , Parkhill J

Ref : Science , 307 :1463 , 2005

Abstract : Cerdeno-Tarraga_2005_Science_307_1463

ESTHER : Cerdeno-Tarraga_2005_Science_307_1463

PubMedSearch : Cerdeno-Tarraga_2005_Science_307_1463

PubMedID: 15746427

Gene_locus related to this paper: bacfn-q5l8p8 , bacfn-q5lef1 , bacfn-q5lh43 , bacfn-q5lhv2 , bacfr-q64mh3 , bacfr-q64n33 , bacfr-q64qs3 , bacfr-q64t24 , bacfr-q64uj8 , bacfr-q64vx6 , bacfr-q64wh2 , bacfr-q64xp9 , bacfr-q650j0

Title : Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance - Holden_2004_Proc.Natl.Acad.Sci.U.S.A_101_9786

Author(s) : Holden MT , Feil EJ , Lindsay JA , Peacock SJ , Day NP , Enright MC , Foster TJ , Moore CE , Hurst L , Atkin R , Barron A , Bason N , Bentley SD , Chillingworth C , Chillingworth T , Churcher C , Clark L , Corton C , Cronin A , Doggett J , Dowd L , Feltwell T , Hance Z , Harris B , Hauser H , Holroyd S , Jagels K , James KD , Lennard N , Line A , Mayes R , Moule S , Mungall K , Ormond D , Quail MA , Rabbinowitsch E , Rutherford K , Sanders M , Sharp S , Simmonds M , Stevens K , Whitehead S , Barrell BG , Spratt BG , Parkhill J

Ref : Proc Natl Acad Sci U S A , 101 :9786 , 2004

Abstract : Holden_2004_Proc.Natl.Acad.Sci.U.S.A_101_9786

ESTHER : Holden_2004_Proc.Natl.Acad.Sci.U.S.A_101_9786

PubMedSearch : Holden_2004_Proc.Natl.Acad.Sci.U.S.A_101_9786

PubMedID: 15213324

Gene_locus related to this paper: staau-d2feb3 , staau-d2uin3 , staau-LIP , staau-lipas , staau-MW0741 , staau-MW2456 , staau-q6gfm6 , staau-SA0011 , staau-SA0569 , staau-SA0572 , staau-SA0897 , staau-SA1143 , staau-SA2240 , staau-SA2306 , staau-SA2367 , staau-SA2422 , staau-SAV0321 , staau-SAV0446 , staau-SAV0457 , staau-SAV0655 , staau-SAV1014 , staau-SAV1765 , staau-SAV1793 , staau-SAV2188 , staau-SAV2350 , staau-SAV2594

Title : Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13 - Hall_2002_Nature_419_527

Author(s) : Hall N , Pain A , Berriman M , Churcher C , Harris B , Harris D , Mungall K , Bowman S , Atkin R , Baker S , Barron A , Brooks K , Buckee CO , Burrows C , Cherevach I , Chillingworth C , Chillingworth T , Christodoulou Z , Clark L , Clark R , Corton C , Cronin A , Davies R , Davis P , Dear P , Dearden F , Doggett J , Feltwell T , Goble A , Goodhead I , Gwilliam R , Hamlin N , Hance Z , Harper D , Hauser H , Hornsby T , Holroyd S , Horrocks P , Humphray S , Jagels K , James KD , Johnson D , Kerhornou A , Knights A , Konfortov B , Kyes S , Larke N , Lawson D , Lennard N , Line A , Maddison M , McLean J , Mooney P , Moule S , Murphy L , Oliver K , Ormond D , Price C , Quail MA , Rabbinowitsch E , Rajandream MA , Rutter S , Rutherford KM , Sanders M , Simmonds M , Seeger K , Sharp S , Smith R , Squares R , Squares S , Stevens K , Taylor K , Tivey A , Unwin L , Whitehead S , Woodward J , Sulston JE , Craig A , Newbold C , Barrell BG

Ref : Nature , 419 :527 , 2002

Abstract : Hall_2002_Nature_419_527

ESTHER : Hall_2002_Nature_419_527

PubMedSearch : Hall_2002_Nature_419_527

PubMedID: 12368867

Gene_locus related to this paper: plaf7-c0h4q4 , plafa-MAL6P1.135 , plafa-PFD0185C , plafa-PFI1775W , plafa-PFI1800W

Report for Barron A

General

References (9)

Report for Barron A

General

References (9)

1. The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli

2. Evidence for niche adaptation in the genome of the bovine pathogen Streptococcus uberis

3. Co-evolution of genomes and plasmids within Chlamydia trachomatis and the emergence in Sweden of a new variant strain

4. Comparative genomics of the emerging human pathogen Photorhabdus asymbiotica with the insect pathogen Photorhabdus luminescens

5. Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287\/91 provides insights into evolutionary and host adaptation pathways

6. Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation

7. Extensive DNA inversions in the B. fragilis genome control variable gene expression

8. Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance

9. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13