ecoli-ybff

Escherichia coli, Escherichia albertii, Escherichia fergusonii, putative esterase/lipase YbfF (EC 3.1.-.-)

Comment

There are more than 1000 strains. Other Uniprot entries and list of strains can be found with the link: Other strains

Relationship

Family : ABHD11-Acetyl_transferase

Block : X

Position in NCBI Life Tree : Escherichia coli

Molecular evidence

No mutation

No kinetic

No disease

No inhibitor

Sequence

Peptide

MKLNIRAQTA QNQHNNSPIV LVHGLFGSLD NLGVLARDLV NDHNIIQVDM RNHGLSPRDP VMNYPAMAQD LVDTLDAQQI DKATFIGHSM GGKAVMALTA LASDRIDKLV AIDIAPVDYH VRRHDEIFAA INAVSESDAQ TRQQAAAIMR QHLNEEGVIQ FLLKSFVDGE WRFNVPVLWD QYPHIVGWEK IPAWDHPALF IPGGNSPYVS EQYRDDLLAQ FPQARAHVIA GAGHWVHAEK PDAVLRAIRR YLND

References

Title : Genomics of rapid adaptation to antibiotics: convergent evolution and scalable sequence amplification - Laehnemann_2014_Genome.Biol.Evol_6_1287
Author(s) : Laehnemann D , Pena-Miller R , Rosenstiel P , Beardmore R , Jansen G , Schulenburg H
Ref : Genome Biol Evol , 6 :1287 , 2014
Abstract : Laehnemann_2014_Genome.Biol.Evol_6_1287
ESTHER : Laehnemann_2014_Genome.Biol.Evol_6_1287
PubMedSearch : Laehnemann_2014_Genome.Biol.Evol_6_1287
PubMedID: 24850796
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR

Title : Complete Genome Sequences of Two Escherichia coli O145:H28 Outbreak Strains of Food Origin - Cooper_2014_Genome.Announc_2_e00482
Author(s) : Cooper KK , Mandrell RE , Louie JW , Korlach J , Clark TA , Parker CT , Huynh S , Chain PS , Ahmed S , Carter MQ
Ref : Genome Announc , 2 :e00482 , 2014
Abstract : Cooper_2014_Genome.Announc_2_e00482
ESTHER : Cooper_2014_Genome.Announc_2_e00482
PubMedSearch : Cooper_2014_Genome.Announc_2_e00482
PubMedID: 24855308
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341

Title : Escherichia coli isolate for studying colonization of the mouse intestine and its application to two-component signaling knockouts - Lasaro_2014_J.Bacteriol_196_1723
Author(s) : Lasaro M , Liu Z , Bishar R , Kelly K , Chattopadhyay S , Paul S , Sokurenko E , Zhu J , Goulian M
Ref : Journal of Bacteriology , 196 :1723 , 2014
Abstract : Lasaro_2014_J.Bacteriol_196_1723
ESTHER : Lasaro_2014_J.Bacteriol_196_1723
PubMedSearch : Lasaro_2014_J.Bacteriol_196_1723
PubMedID: 24563035
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yqia , ecoli-YfhR

Title : Optimization of lag time underlies antibiotic tolerance in evolved bacterial populations - Fridman_2014_Nature_513_418
Author(s) : Fridman O , Goldberg A , Ronin I , Shoresh N , Balaban NQ
Ref : Nature , 513 :418 , 2014
Abstract : Fridman_2014_Nature_513_418
ESTHER : Fridman_2014_Nature_513_418
PubMedSearch : Fridman_2014_Nature_513_418
PubMedID: 25043002
Gene_locus related to this paper: ecoli-fes , ecoli-ybff , ecoli-yhet , ecoli-yuar

Title : Comparative genomics of enterohemorrhagic Escherichia coli O145:H28 demonstrates a common evolutionary lineage with Escherichia coli O157:H7 - Cooper_2014_BMC.Genomics_15_17
Author(s) : Cooper KK , Mandrell RE , Louie JW , Korlach J , Clark TA , Parker CT , Huynh S , Chain PS , Ahmed S , Carter MQ
Ref : BMC Genomics , 15 :17 , 2014
Abstract : Cooper_2014_BMC.Genomics_15_17
ESTHER : Cooper_2014_BMC.Genomics_15_17
PubMedSearch : Cooper_2014_BMC.Genomics_15_17
PubMedID: 24410921
Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR

Title : Genome Sequences of 228 Shiga Toxin-Producing Escherichia coli Isolates and 12 Isolates Representing Other Diarrheagenic E. coli Pathotypes - Trees_2014_Genome.Announc_2_e00718
Author(s) : Trees E , Strockbine N , Changayil S , Ranganathan S , Zhao K , Weil R , Maccannell D , Sabol A , Schmidtke A , Martin H , Stripling D , Ribot EM , Gerner-Smidt P
Ref : Genome Announc , 2 : , 2014
Abstract : Trees_2014_Genome.Announc_2_e00718
ESTHER : Trees_2014_Genome.Announc_2_e00718
PubMedSearch : Trees_2014_Genome.Announc_2_e00718
PubMedID: 25103754
Gene_locus related to this paper: ecoli-fes , ecoli-MCMK , ecoli-ybff , ecoli-yiel , ecoli-ypt1 , ecoli-Z1930 , ecoli-YfhR

Title : Draft Genome Sequences of Extended-Spectrum beta-Lactamase-Producing Escherichia coli Strains Isolated from Patients in Lebanon - Tokajian_2014_Genome.Announc_2_e00123
Author(s) : Tokajian S , Eisen JA , Jospin G , Farra A , Coil DA
Ref : Genome Announc , 2 : , 2014
Abstract : Tokajian_2014_Genome.Announc_2_e00123
ESTHER : Tokajian_2014_Genome.Announc_2_e00123
PubMedSearch : Tokajian_2014_Genome.Announc_2_e00123
PubMedID: 24558252
Gene_locus related to this paper: ecoli-IROD , ecoli-IROE , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0

Title : Genome Sequences of Avian Pathogenic Escherichia coli Strains Isolated from Brazilian Commercial Poultry - Rojas_2013_Genome.Announc_1_e0011013
Author(s) : Rojas TC , Maluta RP , Parizzi LP , Koenigkan LV , Yang J , Yu J , Pereira GA , Dias da Silveira W
Ref : Genome Announc , 1 :e0011013 , 2013
Abstract : Rojas_2013_Genome.Announc_1_e0011013
ESTHER : Rojas_2013_Genome.Announc_1_e0011013
PubMedSearch : Rojas_2013_Genome.Announc_1_e0011013
PubMedID: 23516222
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-IROD , ecoli-IROE , ecoli-estX , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR

Title : Genome Sequences of Two Emerging Non-O157 Shiga Toxin-Producing Escherichia coli Strains - Cao_2013_Genome.Announc_1_E00200
Author(s) : Cao G , Ju W , Rump L , Zhao S , Zou L , Wang C , Strain E , Luo Y , Timme R , Allard M , Brown E , Meng J
Ref : Genome Announc , 1 :E00200 , 2013
Abstract : Cao_2013_Genome.Announc_1_E00200
ESTHER : Cao_2013_Genome.Announc_1_E00200
PubMedSearch : Cao_2013_Genome.Announc_1_E00200
PubMedID: 23682138
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR

Title : Complete Genome Sequence of the Epidemic and Highly Virulent CTX-M-15-Producing H30-Rx Subclone of Escherichia coli ST131 - Andersen_2013_Genome.Announc_1_e00988
Author(s) : Andersen PS , Stegger M , Aziz M , Contente-Cuomo T , Gibbons HS , Keim P , Sokurenko EV , Johnson JR , Price LB
Ref : Genome Announc , 1 :e00988 , 2013
Abstract : Andersen_2013_Genome.Announc_1_e00988
ESTHER : Andersen_2013_Genome.Announc_1_e00988
PubMedSearch : Andersen_2013_Genome.Announc_1_e00988
PubMedID: 24309736
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0

Title : Adaptive evolution of Escherichia coli to an alpha-peptide\/beta-peptoid peptidomimetic induces stable resistance - Hein-Kristensen_2013_PLoS.One_8_e73620
Author(s) : Hein-Kristensen L , Franzyk H , Holch A , Gram L
Ref : PLoS ONE , 8 :e73620 , 2013
Abstract : Hein-Kristensen_2013_PLoS.One_8_e73620
ESTHER : Hein-Kristensen_2013_PLoS.One_8_e73620
PubMedSearch : Hein-Kristensen_2013_PLoS.One_8_e73620
PubMedID: 24040003
Gene_locus related to this paper: ecoli-IROD , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-yqia , ecoli-YfhR

Title : Draft Genome Sequence of Uropathogenic Escherichia coli Strain J96 - Klein_2013_Genome.Announc_1_E00245
Author(s) : Klein EA , Gitai Z
Ref : Genome Announc , 1 : , 2013
Abstract : Klein_2013_Genome.Announc_1_E00245
ESTHER : Klein_2013_Genome.Announc_1_E00245
PubMedSearch : Klein_2013_Genome.Announc_1_E00245
PubMedID: 23469357
Gene_locus related to this paper: ecoli-IROD , ecoli-IROE , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yqia

Title : Adaptive mutations and replacements of virulence traits in the Escherichia coli O104:H4 outbreak population - Guy_2013_PLoS.One_8_e63027
Author(s) : Guy L , Jernberg C , Arven Norling J , Ivarsson S , Hedenstrom I , Melefors O , Liljedahl U , Engstrand L , Andersson SG
Ref : PLoS ONE , 8 :e63027 , 2013
Abstract : Guy_2013_PLoS.One_8_e63027
ESTHER : Guy_2013_PLoS.One_8_e63027
PubMedSearch : Guy_2013_PLoS.One_8_e63027
PubMedID: 23675451
Gene_locus related to this paper: ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-yqia

Title : Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes - Turner_2012_J.Ind.Microbiol.Biotechnol_39_629
Author(s) : Turner PC , Yomano LP , Jarboe LR , York SW , Baggett CL , Moritz BE , Zentz EB , Shanmugam KT , Ingram LO
Ref : J Ind Microbiol Biotechnol , 39 :629 , 2012
Abstract : Turner_2012_J.Ind.Microbiol.Biotechnol_39_629
ESTHER : Turner_2012_J.Ind.Microbiol.Biotechnol_39_629
PubMedSearch : Turner_2012_J.Ind.Microbiol.Biotechnol_39_629
PubMedID: 22075923
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR

Title : Draft genome sequences of the diarrheagenic Escherichia coli collection - Hazen_2012_J.Bacteriol_194_3026
Author(s) : Hazen TH , Sahl JW , Redman JC , Morris CR , Daugherty SC , Chibucos MC , Sengamalay NA , Fraser-Liggett CM , Steinsland H , Whittam TS , Whittam B , Manning SD , Rasko DA
Ref : Journal of Bacteriology , 194 :3026 , 2012
Abstract : Hazen_2012_J.Bacteriol_194_3026
ESTHER : Hazen_2012_J.Bacteriol_194_3026
PubMedSearch : Hazen_2012_J.Bacteriol_194_3026
PubMedID: 22582382
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR

Title : Phylogenetic analysis of non-O157 Shiga toxin-producing Escherichia coli strains by whole-genome sequencing - Ju_2012_J.Clin.Microbiol_50_4123
Author(s) : Ju W , Cao G , Rump L , Strain E , Luo Y , Timme R , Allard M , Zhao S , Brown E , Meng J
Ref : J Clin Microbiol , 50 :4123 , 2012
Abstract : Ju_2012_J.Clin.Microbiol_50_4123
ESTHER : Ju_2012_J.Clin.Microbiol_50_4123
PubMedSearch : Ju_2012_J.Clin.Microbiol_50_4123
PubMedID: 23052305
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR

Title : A novel non-homologous recombination-mediated mechanism for Escherichia coli unilateral flagellar phase variation - Liu_2012_Nucleic.Acids.Res_40_4530
Author(s) : Liu B , Hu B , Zhou Z , Guo D , Guo X , Ding P , Feng L , Wang L
Ref : Nucleic Acids Research , 40 :4530 , 2012
Abstract : Liu_2012_Nucleic.Acids.Res_40_4530
ESTHER : Liu_2012_Nucleic.Acids.Res_40_4530
PubMedSearch : Liu_2012_Nucleic.Acids.Res_40_4530
PubMedID: 22287625
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-yqia , ecoli-YfhR

Title : Genome analysis of bovine-mastitis-associated Escherichia coli O32:H37 strain P4 - Blum_2012_J.Bacteriol_194_3732
Author(s) : Blum S , Sela N , Heller ED , Sela S , Leitner G
Ref : Journal of Bacteriology , 194 :3732 , 2012
Abstract : Blum_2012_J.Bacteriol_194_3732
ESTHER : Blum_2012_J.Bacteriol_194_3732
PubMedSearch : Blum_2012_J.Bacteriol_194_3732
PubMedID: 22740662
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-yqia , ecoli-yuar , ecoli-Z1930 , ecoli-YfhR

Title : An esterase with superior activity and enantioselectivity towards 1,2-O-isopropylideneglycerol esters obtained by protein design - Godinho_2012_Adv.Synth.Catal_354_3009
Author(s) : Godinho LF , Reis CR , van Merkerk R , Poelarends GL , Quax WJ
Ref : Adv Synth Catal , 354 :3009 , 2012
Abstract : Godinho_2012_Adv.Synth.Catal_354_3009
ESTHER : Godinho_2012_Adv.Synth.Catal_354_3009
PubMedSearch : Godinho_2012_Adv.Synth.Catal_354_3009
PubMedID:
Gene_locus related to this paper: ecoli-ybff

Title : Genome sequences and phylogenetic analysis of K88- and F18-positive porcine enterotoxigenic Escherichia coli - Shepard_2012_J.Bacteriol_194_395
Author(s) : Shepard SM , Danzeisen JL , Isaacson RE , Seemann T , Achtman M , Johnson TJ
Ref : Journal of Bacteriology , 194 :395 , 2012
Abstract : Shepard_2012_J.Bacteriol_194_395
ESTHER : Shepard_2012_J.Bacteriol_194_395
PubMedSearch : Shepard_2012_J.Bacteriol_194_395
PubMedID: 22081385
Gene_locus related to this paper: ecoli-fes , ecoli-estX , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yqia , ecoli-YfhR

Title : Escherichia coli serotype O55:H7 diversity supports parallel acquisition of bacteriophage at Shiga toxin phage insertion sites during evolution of the O157:H7 lineage - Kyle_2012_J.Bacteriol_194_1885
Author(s) : Kyle JL , Cummings CA , Parker CT , Quinones B , Vatta P , Newton E , Huynh S , Swimley M , Degoricija L , Barker M , Fontanoz S , Nguyen K , Patel R , Fang R , Tebbs R , Petrauskene O , Furtado M , Mandrell RE
Ref : Journal of Bacteriology , 194 :1885 , 2012
Abstract : Kyle_2012_J.Bacteriol_194_1885
ESTHER : Kyle_2012_J.Bacteriol_194_1885
PubMedSearch : Kyle_2012_J.Bacteriol_194_1885
PubMedID: 22328665
Gene_locus related to this paper: ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yhet , ecoli-yqia , ecoli-Z1930

Title : Genome sequence of Escherichia coli J53, a reference strain for genetic studies - Yi_2012_J.Bacteriol_194_3742
Author(s) : Yi H , Cho YJ , Yong D , Chun J
Ref : Journal of Bacteriology , 194 :3742 , 2012
Abstract : Yi_2012_J.Bacteriol_194_3742
ESTHER : Yi_2012_J.Bacteriol_194_3742
PubMedSearch : Yi_2012_J.Bacteriol_194_3742
PubMedID: 22740669
Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel

Title : Complete genome sequence of adherent invasive Escherichia coli UM146 isolated from Ileal Crohn's disease biopsy tissue - Krause_2011_J.Bacteriol_193_583
Author(s) : Krause DO , Little AC , Dowd SE , Bernstein CN
Ref : Journal of Bacteriology , 193 :583 , 2011
Abstract : Krause_2011_J.Bacteriol_193_583
ESTHER : Krause_2011_J.Bacteriol_193_583
PubMedSearch : Krause_2011_J.Bacteriol_193_583
PubMedID: 21075930
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-entf , ecoli-IROD , ecoli-IROE , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-YFBB , ecoli-yiel , ecoli-yqia , ecoli-YfhR , ecout-q1r7l6

Title : Genome of multidrug-resistant uropathogenic Escherichia coli strain NA114 from India - Avasthi_2011_J.Bacteriol_193_4272
Author(s) : Avasthi TS , Kumar N , Baddam R , Hussain A , Nandanwar N , Jadhav S , Ahmed N
Ref : Journal of Bacteriology , 193 :4272 , 2011
Abstract : Avasthi_2011_J.Bacteriol_193_4272
ESTHER : Avasthi_2011_J.Bacteriol_193_4272
PubMedSearch : Avasthi_2011_J.Bacteriol_193_4272
PubMedID: 21685291
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yiel , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0

Title : Insights into a multidrug resistant Escherichia coli pathogen of the globally disseminated ST131 lineage: genome analysis and virulence mechanisms - Totsika_2011_PLoS.One_6_e26578
Author(s) : Totsika M , Beatson SA , Sarkar S , Phan MD , Petty NK , Bachmann N , Szubert M , Sidjabat HE , Paterson DL , Upton M , Schembri MA
Ref : PLoS ONE , 6 :e26578 , 2011
Abstract : Totsika_2011_PLoS.One_6_e26578
ESTHER : Totsika_2011_PLoS.One_6_e26578
PubMedSearch : Totsika_2011_PLoS.One_6_e26578
PubMedID: 22053197
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yqia , ecolx-f4suw9 , ecolx-g0dan0

Title : Discovery of an Escherichia coli esterase with high activity and enantioselectivity toward 1,2-O-isopropylideneglycerol esters - Godinho_2011_Appl.Environ.Microbiol_77_6094
Author(s) : Godinho LF , Reis CR , Tepper PG , Poelarends GJ , Quax WJ
Ref : Applied Environmental Microbiology , 77 :6094 , 2011
Abstract : Godinho_2011_Appl.Environ.Microbiol_77_6094
ESTHER : Godinho_2011_Appl.Environ.Microbiol_77_6094
PubMedSearch : Godinho_2011_Appl.Environ.Microbiol_77_6094
PubMedID: 21764964
Gene_locus related to this paper: ecoli-ybff

Title : Genome sequence of Escherichia coli XH140A, which produces L-threonine - Yang_2011_J.Bacteriol_193_6090
Author(s) : Yang H , Liao Y , Wang B , Lin Y , Pan L
Ref : Journal of Bacteriology , 193 :6090 , 2011
Abstract : Yang_2011_J.Bacteriol_193_6090
ESTHER : Yang_2011_J.Bacteriol_193_6090
PubMedSearch : Yang_2011_J.Bacteriol_193_6090
PubMedID: 21994923
Gene_locus related to this paper: ecoli-ybff , ecoli-ycfp , ecoli-yqia , ecoli-YfhR

Title : Complete genome sequence of the neonatal-meningitis-associated Escherichia coli strain CE10 - Lu_2011_J.Bacteriol_193_7005
Author(s) : Lu S , Zhang X , Zhu Y , Kim KS , Yang J , Jin Q
Ref : Journal of Bacteriology , 193 :7005 , 2011
Abstract : Lu_2011_J.Bacteriol_193_7005
ESTHER : Lu_2011_J.Bacteriol_193_7005
PubMedSearch : Lu_2011_J.Bacteriol_193_7005
PubMedID: 22123760
Gene_locus related to this paper: ecoli-ybff , ecoli-YFBB , ecoli-yqia , ecoli-YfhR

Title : Rates of mutation and host transmission for an Escherichia coli clone over 3 years - Reeves_2011_PLoS.One_6_e26907
Author(s) : Reeves PR , Liu B , Zhou Z , Li D , Guo D , Ren Y , Clabots C , Lan R , Johnson JR , Wang L
Ref : PLoS ONE , 6 :e26907 , 2011
Abstract : Reeves_2011_PLoS.One_6_e26907
ESTHER : Reeves_2011_PLoS.One_6_e26907
PubMedSearch : Reeves_2011_PLoS.One_6_e26907
PubMedID: 22046404
Gene_locus related to this paper: ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yqia

Title : Host imprints on bacterial genomes--rapid, divergent evolution in individual patients - Zdziarski_2010_PLoS.Pathog_6_e1001078
Author(s) : Zdziarski J , Brzuszkiewicz E , Wullt B , Liesegang H , Biran D , Voigt B , Gronberg-Hernandez J , Ragnarsdottir B , Hecker M , Ron EZ , Daniel R , Gottschalk G , Hacker J , Svanborg C , Dobrindt U
Ref : PLoS Pathog , 6 :e1001078 , 2010
Abstract : Zdziarski_2010_PLoS.Pathog_6_e1001078
ESTHER : Zdziarski_2010_PLoS.Pathog_6_e1001078
PubMedSearch : Zdziarski_2010_PLoS.Pathog_6_e1001078
PubMedID: 20865122
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-yafa , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yqia , ecoli-YfhR

Title : Genome sequence of adherent-invasive Escherichia coli and comparative genomic analysis with other E. coli pathotypes - Nash_2010_BMC.Genomics_11_667
Author(s) : Nash JH , Villegas A , Kropinski AM , Aguilar-Valenzuela R , Konczy P , Mascarenhas M , Ziebell K , Torres AG , Karmali MA , Coombes BK
Ref : BMC Genomics , 11 :667 , 2010
Abstract : Nash_2010_BMC.Genomics_11_667
ESTHER : Nash_2010_BMC.Genomics_11_667
PubMedSearch : Nash_2010_BMC.Genomics_11_667
PubMedID: 21108814
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-entf , ecoli-IROD , ecoli-rdmC , ecoli-yafa , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecos5-d2nhh3

Title : A commensal gone bad: complete genome sequence of the prototypical enterotoxigenic Escherichia coli strain H10407 - Crossman_2010_J.Bacteriol_192_5822
Author(s) : Crossman LC , Chaudhuri RR , Beatson SA , Wells TJ , Desvaux M , Cunningham AF , Petty NK , Mahon V , Brinkley C , Hobman JL , Savarino SJ , Turner SM , Pallen MJ , Penn CW , Parkhill J , Turner AK , Johnson TJ , Thomson NR , Smith SG , Henderson IR
Ref : Journal of Bacteriology , 192 :5822 , 2010
Abstract : Crossman_2010_J.Bacteriol_192_5822
ESTHER : Crossman_2010_J.Bacteriol_192_5822
PubMedSearch : Crossman_2010_J.Bacteriol_192_5822
PubMedID: 20802035
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-YFBB , ecoli-yiel , ecoli-yqia

Title : Derivation of Escherichia coli O157:H7 from its O55:H7 precursor - Zhou_2010_PLoS.One_5_e8700
Author(s) : Zhou Z , Li X , Liu B , Beutin L , Xu J , Ren Y , Feng L , Lan R , Reeves PR , Wang L
Ref : PLoS ONE , 5 :e8700 , 2010
Abstract : Zhou_2010_PLoS.One_5_e8700
ESTHER : Zhou_2010_PLoS.One_5_e8700
PubMedSearch : Zhou_2010_PLoS.One_5_e8700
PubMedID: 20090843
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z0347 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR

Title : Complete genome sequence of the wild-type commensal Escherichia coli strain SE15, belonging to phylogenetic group B2 - Toh_2010_J.Bacteriol_192_1165
Author(s) : Toh H , Oshima K , Toyoda A , Ogura Y , Ooka T , Sasamoto H , Park SH , Iyoda S , Kurokawa K , Morita H , Itoh K , Taylor TD , Hayashi T , Hattori M
Ref : Journal of Bacteriology , 192 :1165 , 2010
Abstract : Toh_2010_J.Bacteriol_192_1165
ESTHER : Toh_2010_J.Bacteriol_192_1165
PubMedSearch : Toh_2010_J.Bacteriol_192_1165
PubMedID: 20008064
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecos5-d2nhh3 , yerpe-YBTT , ecolx-f4suw9

Title : Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042 - Chaudhuri_2010_PLoS.One_5_e8801
Author(s) : Chaudhuri RR , Sebaihia M , Hobman JL , Webber MA , Leyton DL , Goldberg MD , Cunningham AF , Scott-Tucker A , Ferguson PR , Thomas CM , Frankel G , Tang CM , Dudley EG , Roberts IS , Rasko DA , Pallen MJ , Parkhill J , Nataro JP , Thomson NR , Henderson IR
Ref : PLoS ONE , 5 :e8801 , 2010
Abstract : Chaudhuri_2010_PLoS.One_5_e8801
ESTHER : Chaudhuri_2010_PLoS.One_5_e8801
PubMedSearch : Chaudhuri_2010_PLoS.One_5_e8801
PubMedID: 20098708
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-MCMK , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z0347 , ecoli-YfhR , yerpe-YBTT

Title : Identification of protective and broadly conserved vaccine antigens from the genome of extraintestinal pathogenic Escherichia coli - Moriel_2010_Proc.Natl.Acad.Sci.U.S.A_107_9072
Author(s) : Moriel DG , Bertoldi I , Spagnuolo A , Marchi S , Rosini R , Nesta B , Pastorello I , Corea VA , Torricelli G , Cartocci E , Savino S , Scarselli M , Dobrindt U , Hacker J , Tettelin H , Tallon LJ , Sullivan S , Wieler LH , Ewers C , Pickard D , Dougan G , Fontana MR , Rappuoli R , Pizza M , Serino L
Ref : Proc Natl Acad Sci U S A , 107 :9072 , 2010
Abstract : Moriel_2010_Proc.Natl.Acad.Sci.U.S.A_107_9072
ESTHER : Moriel_2010_Proc.Natl.Acad.Sci.U.S.A_107_9072
PubMedSearch : Moriel_2010_Proc.Natl.Acad.Sci.U.S.A_107_9072
PubMedID: 20439758
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C2451 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR , ecout-q1r7l6 , yerpe-YBTT

Title : Genome sequences of Escherichia coli B strains REL606 and BL21(DE3) - Jeong_2009_J.Mol.Biol_394_644
Author(s) : Jeong H , Barbe V , Lee CH , Vallenet D , Yu DS , Choi SH , Couloux A , Lee SW , Yoon SH , Cattolico L , Hur CG , Park HS , Segurens B , Kim SC , Oh TK , Lenski RE , Studier FW , Daegelen P , Kim JF
Ref : Journal of Molecular Biology , 394 :644 , 2009
Abstract : Jeong_2009_J.Mol.Biol_394_644
ESTHER : Jeong_2009_J.Mol.Biol_394_644
PubMedSearch : Jeong_2009_J.Mol.Biol_394_644
PubMedID: 19786035
Gene_locus related to this paper: eco57-b3a913 , ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR

Title : Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence - Kulasekara_2009_Infect.Immun_77_3713
Author(s) : Kulasekara BR , Jacobs M , Zhou Y , Wu Z , Sims E , Saenphimmachak C , Rohmer L , Ritchie JM , Radey M , McKevitt M , Freeman TL , Hayden H , Haugen E , Gillett W , Fong C , Chang J , Beskhlebnaya V , Waldor MK , Samadpour M , Whittam TS , Kaul R , Brittnacher M , Miller SI
Ref : Infect Immun , 77 :3713 , 2009
Abstract : Kulasekara_2009_Infect.Immun_77_3713
ESTHER : Kulasekara_2009_Infect.Immun_77_3713
PubMedSearch : Kulasekara_2009_Infect.Immun_77_3713
PubMedID: 19564389
Gene_locus related to this paper: eco57-b3a913 , ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-MCMK , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z0347 , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR

Title : Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli - Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939
Author(s) : Ogura Y , Ooka T , Iguchi A , Toh H , Asadulghani M , Oshima K , Kodama T , Abe H , Nakayama K , Kurokawa K , Tobe T , Hattori M , Hayashi T
Ref : Proc Natl Acad Sci U S A , 106 :17939 , 2009
Abstract : Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939
ESTHER : Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939
PubMedSearch : Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939
PubMedID: 19815525
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C2429 , ecoli-C4836 , ecoli-d7xp23 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR , yerpe-YBTT

Title : A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis - Leopold_2009_Proc.Natl.Acad.Sci.U.S.A_106_8713
Author(s) : Leopold SR , Magrini V , Holt NJ , Shaikh N , Mardis ER , Cagno J , Ogura Y , Iguchi A , Hayashi T , Mellmann A , Karch H , Besser TE , Sawyer SA , Whittam TS , Tarr PI
Ref : Proc Natl Acad Sci U S A , 106 :8713 , 2009
Abstract : Leopold_2009_Proc.Natl.Acad.Sci.U.S.A_106_8713
ESTHER : Leopold_2009_Proc.Natl.Acad.Sci.U.S.A_106_8713
PubMedSearch : Leopold_2009_Proc.Natl.Acad.Sci.U.S.A_106_8713
PubMedID: 19439656
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , neucr-q7sha3

Title : Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348\/69 - Iguchi_2009_J.Bacteriol_191_347
Author(s) : Iguchi A , Thomson NR , Ogura Y , Saunders D , Ooka T , Henderson IR , Harris D , Asadulghani M , Kurokawa K , Dean P , Kenny B , Quail MA , Thurston S , Dougan G , Hayashi T , Parkhill J , Frankel G
Ref : Journal of Bacteriology , 191 :347 , 2009
Abstract : Iguchi_2009_J.Bacteriol_191_347
ESTHER : Iguchi_2009_J.Bacteriol_191_347
PubMedSearch : Iguchi_2009_J.Bacteriol_191_347
PubMedID: 18952797
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR

Title : Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12 - Ferenci_2009_J.Bacteriol_191_4025
Author(s) : Ferenci T , Zhou Z , Betteridge T , Ren Y , Liu Y , Feng L , Reeves PR , Wang L
Ref : Journal of Bacteriology , 191 :4025 , 2009
Abstract : Ferenci_2009_J.Bacteriol_191_4025
ESTHER : Ferenci_2009_J.Bacteriol_191_4025
PubMedSearch : Ferenci_2009_J.Bacteriol_191_4025
PubMedID: 19376874
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR

Title : The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse - Durfee_2008_J.Bacteriol_190_2597
Author(s) : Durfee T , Nelson R , Baldwin S , Plunkett G, 3rd , Burland V , Mau B , Petrosino JF , Qin X , Muzny DM , Ayele M , Gibbs RA , Csorgo B , Posfai G , Weinstock GM , Blattner FR
Ref : Journal of Bacteriology , 190 :2597 , 2008
Abstract : Durfee_2008_J.Bacteriol_190_2597
ESTHER : Durfee_2008_J.Bacteriol_190_2597
PubMedSearch : Durfee_2008_J.Bacteriol_190_2597
PubMedID: 18245285
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR

Title : Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult - Oshima_2008_DNA.Res_15_375
Author(s) : Oshima K , Toh H , Ogura Y , Sasamoto H , Morita H , Park SH , Ooka T , Iyoda S , Taylor TD , Hayashi T , Itoh K , Hattori M
Ref : DNA Research , 15 :375 , 2008
Abstract : Oshima_2008_DNA.Res_15_375
ESTHER : Oshima_2008_DNA.Res_15_375
PubMedSearch : Oshima_2008_DNA.Res_15_375
PubMedID: 18931093
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR

Title : Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5 - Fricke_2008_J.Bacteriol_190_6779
Author(s) : Fricke WF , Wright MS , Lindell AH , Harkins DM , Baker-Austin C , Ravel J , Stepanauskas R
Ref : Journal of Bacteriology , 190 :6779 , 2008
Abstract : Fricke_2008_J.Bacteriol_190_6779
ESTHER : Fricke_2008_J.Bacteriol_190_6779
PubMedSearch : Fricke_2008_J.Bacteriol_190_6779
PubMedID: 18708504
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-estX , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , ecosm-b1lhu2

Title : High-resolution structure of ybfF from Escherichia coli K12: a unique substrate-binding crevice generated by domain arrangement. - Park_2008_J.Mol.Biol_376_1426
Author(s) : Park SY , Lee SH , Lee J , Nishi K , Kim YS , Jung CH , Kim JS
Ref : Journal of Molecular Biology , 376 :1426 , 2008
Abstract : Park_2008_J.Mol.Biol_376_1426
ESTHER : Park_2008_J.Mol.Biol_376_1426
PubMedSearch : Park_2008_J.Mol.Biol_376_1426
PubMedID: 18215690
Gene_locus related to this paper: ecoli-ybff

Title : The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates - Rasko_2008_J.Bacteriol_190_6881
Author(s) : Rasko DA , Rosovitz MJ , Myers GS , Mongodin EF , Fricke WF , Gajer P , Crabtree J , Sebaihia M , Thomson NR , Chaudhuri R , Henderson IR , Sperandio V , Ravel J
Ref : Journal of Bacteriology , 190 :6881 , 2008
Abstract : Rasko_2008_J.Bacteriol_190_6881
ESTHER : Rasko_2008_J.Bacteriol_190_6881
PubMedSearch : Rasko_2008_J.Bacteriol_190_6881
PubMedID: 18676672
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z2445 , ecoli-YfhR

Title : Crystallization and preliminary X-ray diffraction analysis of ybfF, a new esterase from Escherichia coli K12 - Park_2007_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_63_1051
Author(s) : Park SY , Lee SH , Lee J , Jung CH , Kim JS
Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 63 :1051 , 2007
Abstract : Park_2007_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_63_1051
ESTHER : Park_2007_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_63_1051
PubMedSearch : Park_2007_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_63_1051
PubMedID: 18084091
Gene_locus related to this paper: ecoli-ybff

Title : The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes - Johnson_2007_J.Bacteriol_189_3228
Author(s) : Johnson TJ , Kariyawasam S , Wannemuehler Y , Mangiamele P , Johnson SJ , Doetkott C , Skyberg JA , Lynne AM , Johnson JR , Nolan LK
Ref : Journal of Bacteriology , 189 :3228 , 2007
Abstract : Johnson_2007_J.Bacteriol_189_3228
ESTHER : Johnson_2007_J.Bacteriol_189_3228
PubMedSearch : Johnson_2007_J.Bacteriol_189_3228
PubMedID: 17293413
Gene_locus related to this paper: ecok1-a1acc0 , ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR , ecout-q1r7l6 , yerpe-YBTT

Title : Role of pathogenicity island-associated integrases in the genome plasticity of uropathogenic Escherichia coli strain 536 - Hochhut_2006_Mol.Microbiol_61_584
Author(s) : Hochhut B , Wilde C , Balling G , Middendorf B , Dobrindt U , Brzuszkiewicz E , Gottschalk G , Carniel E , Hacker J
Ref : Molecular Microbiology , 61 :584 , 2006
Abstract : Hochhut_2006_Mol.Microbiol_61_584
ESTHER : Hochhut_2006_Mol.Microbiol_61_584
PubMedSearch : Hochhut_2006_Mol.Microbiol_61_584
PubMedID: 16879640
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C2451 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , ecolx-q707d7 , yerpe-YBTT

Title : Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach - Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977
Author(s) : Chen SL , Hung CS , Xu J , Reigstad CS , Magrini V , Sabo A , Blasiar D , Bieri T , Meyer RR , Ozersky P , Armstrong JR , Fulton RS , Latreille JP , Spieth J , Hooton TM , Mardis ER , Hultgren SJ , Gordon JI
Ref : Proc Natl Acad Sci U S A , 103 :5977 , 2006
Abstract : Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977
ESTHER : Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977
PubMedSearch : Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977
PubMedID: 16585510
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C2451 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecout-q1r7l6 , yerpe-YBTT

Title : Enzyme genomics: Application of general enzymatic screens to discover new enzymes - Kuznetsova_2005_FEMS.Microbiol.Rev_29_263
Author(s) : Kuznetsova E , Proudfoot M , Sanders SA , Reinking J , Savchenko A , Arrowsmith CH , Edwards AM , Yakunin AF
Ref : FEMS Microbiology Reviews , 29 :263 , 2005
Abstract : Kuznetsova_2005_FEMS.Microbiol.Rev_29_263
ESTHER : Kuznetsova_2005_FEMS.Microbiol.Rev_29_263
PubMedSearch : Kuznetsova_2005_FEMS.Microbiol.Rev_29_263
PubMedID: 15808744
Gene_locus related to this paper: ecoli-yafa , ecoli-ybff , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yjfp , ecoli-ypfh , ecoli-yqia , ecoli-yuar

Title : Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli - Welch_2002_Proc.Natl.Acad.Sci.U.S.A_99_17020
Author(s) : Welch RA , Burland V , Plunkett G, 3rd , Redford P , Roesch P , Rasko D , Buckles EL , Liou SR , Boutin A , Hackett J , Stroud D , Mayhew GF , Rose DJ , Zhou S , Schwartz DC , Perna NT , Mobley HL , Donnenberg MS , Blattner FR
Ref : Proc Natl Acad Sci U S A , 99 :17020 , 2002
Abstract : Welch_2002_Proc.Natl.Acad.Sci.U.S.A_99_17020
ESTHER : Welch_2002_Proc.Natl.Acad.Sci.U.S.A_99_17020
PubMedSearch : Welch_2002_Proc.Natl.Acad.Sci.U.S.A_99_17020
PubMedID: 12471157
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C2451 , ecoli-C3633 , ecoli-C3636 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , yerpe-YBTT , ecol6-a0a0h2vaz5

Title : Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 - Hayashi_2001_DNA.Res_8_11
Author(s) : Hayashi T , Makino K , Ohnishi M , Kurokawa K , Ishii K , Yokoyama K , Han CG , Ohtsubo E , Nakayama K , Murata T , Tanaka M , Tobe T , Iida T , Takami H , Honda T , Sasakawa C , Ogasawara N , Yasunaga T , Kuhara S , Shiba T , Hattori M , Shinagawa H
Ref : DNA Research , 8 :11 , 2001
Abstract : Hayashi_2001_DNA.Res_8_11
ESTHER : Hayashi_2001_DNA.Res_8_11
PubMedSearch : Hayashi_2001_DNA.Res_8_11
PubMedID: 11258796
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-entf , ecoli-fes , ecoli-MCMK , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z0347 , ecoli-Z1341 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR

Title : Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography - Fountoulakis_1999_Electrophoresis_20_2181
Author(s) : Fountoulakis M , Takacs MF , Berndt P , Langen H , Takacs B
Ref : Electrophoresis , 20 :2181 , 1999
Abstract : Fountoulakis_1999_Electrophoresis_20_2181
ESTHER : Fountoulakis_1999_Electrophoresis_20_2181
PubMedSearch : Fountoulakis_1999_Electrophoresis_20_2181
PubMedID: 10493123
Gene_locus related to this paper: ecoli-ybff

Title : The complete genome sequence of Escherichia coli K-12 - Blattner_1997_Science_277_1453
Author(s) : Blattner FR , Plunkett G, 3rd , Bloch CA , Perna NT , Burland V , Riley M , Collado-Vides J , Glasner JD , Rode CK , Mayhew GF , Gregor J , Davis NW , Kirkpatrick HA , Goeden MA , Rose DJ , Mau B , Shao Y
Ref : Science , 277 :1453 , 1997
Abstract : Blattner_1997_Science_277_1453
ESTHER : Blattner_1997_Science_277_1453
PubMedSearch : Blattner_1997_Science_277_1453
PubMedID: 9278503
Gene_locus related to this paper: ecoli-Aes , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR

Title : A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map - Oshima_1996_DNA.Res_3_137
Author(s) : Oshima T , Aiba H , Baba T , Fujita K , Hayashi K , Honjo A , Ikemoto K , Inada T , Itoh T , Kajihara M , Kanai K , Kashimoto K , Kimura S , Kitagawa M , Makino K , Masuda S , Miki T , Mizobuchi K , Mori H , Motomura K , Nakamura Y , Nashimoto H , Nishio Y , Saito N , Horiuchi T , et al.
Ref : DNA Research , 3 :137 , 1996
Abstract : Oshima_1996_DNA.Res_3_137
ESTHER : Oshima_1996_DNA.Res_3_137
PubMedSearch : Oshima_1996_DNA.Res_3_137
PubMedID: 8905232
Gene_locus related to this paper: ecoli-rutD , ecoli-fes , ecoli-ybff , ecoli-ycfp