Lykidis A

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References (13)

Title : Complete genome sequence of Arthrobacter phenanthrenivorans type strain (Sphe3) - Kallimanis_2011_Stand.Genomic.Sci_4_123
Author(s) : Kallimanis A , LaButti KM , Lapidus A , Clum A , Lykidis A , Mavromatis K , Pagani I , Liolios K , Ivanova N , Goodwin L , Pitluck S , Chen A , Palaniappan K , Markowitz V , Bristow J , Velentzas AD , Perisynakis A , Ouzounis CC , Kyrpides NC , Koukkou AI , Drainas C
Ref : Stand Genomic Sci , 4 :123 , 2011
Abstract : Kallimanis_2011_Stand.Genomic.Sci_4_123
ESTHER : Kallimanis_2011_Stand.Genomic.Sci_4_123
PubMedSearch : Kallimanis_2011_Stand.Genomic.Sci_4_123
PubMedID: 21677849
Gene_locus related to this paper: artpp-f0m1v4 , artpp-f0m1v5 , artpp-f0m2s7 , artpp-f0m5g1 , artpp-f0m7u7 , artpp-f0m8i0 , artpp-f0m8w6 , artpp-f0m8w7 , artpp-f0m393 , artpp-f0mb51

Title : The complete multipartite genome sequence of Cupriavidus necator JMP134, a versatile pollutant degrader - Lykidis_2010_PLoS.One_5_e9729
Author(s) : Lykidis A , Perez-Pantoja D , Ledger T , Mavromatis K , Anderson IJ , Ivanova NN , Hooper SD , Lapidus A , Lucas S , Gonzalez B , Kyrpides NC
Ref : PLoS ONE , 5 :e9729 , 2010
Abstract : Lykidis_2010_PLoS.One_5_e9729
ESTHER : Lykidis_2010_PLoS.One_5_e9729
PubMedSearch : Lykidis_2010_PLoS.One_5_e9729
PubMedID: 20339589
Gene_locus related to this paper: cupnj-hboh

Title : Genome sequence of the Fleming strain of Micrococcus luteus, a simple free-living actinobacterium - Young_2010_J.Bacteriol_192_841
Author(s) : Young M , Artsatbanov V , Beller HR , Chandra G , Chater KF , Dover LG , Goh EB , Kahan T , Kaprelyants AS , Kyrpides N , Lapidus A , Lowry SR , Lykidis A , Mahillon J , Markowitz V , Mavromatis K , Mukamolova GV , Oren A , Rokem JS , Smith MC , Young DI , Greenblatt CL
Ref : Journal of Bacteriology , 192 :841 , 2010
Abstract : Young_2010_J.Bacteriol_192_841
ESTHER : Young_2010_J.Bacteriol_192_841
PubMedSearch : Young_2010_J.Bacteriol_192_841
PubMedID: 19948807
Gene_locus related to this paper: miclc-c5cbn3

Title : Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii - Mavromatis_2009_PLoS.One_4_e4192
Author(s) : Mavromatis K , Ivanova N , Anderson I , Lykidis A , Hooper SD , Sun H , Kunin V , Lapidus A , Hugenholtz P , Patel B , Kyrpides NC
Ref : PLoS ONE , 4 :e4192 , 2009
Abstract : Mavromatis_2009_PLoS.One_4_e4192
ESTHER : Mavromatis_2009_PLoS.One_4_e4192
PubMedSearch : Mavromatis_2009_PLoS.One_4_e4192
PubMedID: 19145256
Gene_locus related to this paper: haloh-b8cwa6 , haloh-b8czv0

Title : Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction - Anderson_2008_J.Bacteriol_190_2957
Author(s) : Anderson I , Rodriguez J , Susanti D , Porat I , Reich C , Ulrich LE , Elkins JG , Mavromatis K , Lykidis A , Kim E , Thompson LS , Nolan M , Land M , Copeland A , Lapidus A , Lucas S , Detter C , Zhulin IB , Olsen GJ , Whitman W , Mukhopadhyay B , Bristow J , Kyrpides N
Ref : Journal of Bacteriology , 190 :2957 , 2008
Abstract : Anderson_2008_J.Bacteriol_190_2957
ESTHER : Anderson_2008_J.Bacteriol_190_2957
PubMedSearch : Anderson_2008_J.Bacteriol_190_2957
PubMedID: 18263724
Gene_locus related to this paper: thepd-a1s004

Title : Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX - Lykidis_2007_J.Bacteriol_189_2477
Author(s) : Lykidis A , Mavromatis K , Ivanova N , Anderson I , Land M , DiBartolo G , Martinez M , Lapidus A , Lucas S , Copeland A , Richardson P , Wilson DB , Kyrpides N
Ref : Journal of Bacteriology , 189 :2477 , 2007
Abstract : Lykidis_2007_J.Bacteriol_189_2477
ESTHER : Lykidis_2007_J.Bacteriol_189_2477
PubMedSearch : Lykidis_2007_J.Bacteriol_189_2477
PubMedID: 17209016
Gene_locus related to this paper: thefu-q6a0i3 , thefy-q47l17 , thefy-q47p38 , thefy-q47pm5

Title : The genome of the obligately intracellular bacterium Ehrlichia canis reveals themes of complex membrane structure and immune evasion strategies - Mavromatis_2006_J.Bacteriol_188_4015
Author(s) : Mavromatis K , Doyle CK , Lykidis A , Ivanova N , Francino MP , Chain P , Shin M , Malfatti S , Larimer F , Copeland A , Detter JC , Land M , Richardson PM , Yu XJ , Walker DH , McBride JW , Kyrpides NC
Ref : Journal of Bacteriology , 188 :4015 , 2006
Abstract : Mavromatis_2006_J.Bacteriol_188_4015
ESTHER : Mavromatis_2006_J.Bacteriol_188_4015
PubMedSearch : Mavromatis_2006_J.Bacteriol_188_4015
PubMedID: 16707693
Gene_locus related to this paper: ehrcj-q3ys50

Title : Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000 - Feil_2005_Proc.Natl.Acad.Sci.U.S.A_102_11064
Author(s) : Feil H , Feil WS , Chain P , Larimer F , DiBartolo G , Copeland A , Lykidis A , Trong S , Nolan M , Goltsman E , Thiel J , Malfatti S , Loper JE , Lapidus A , Detter JC , Land M , Richardson PM , Kyrpides NC , Ivanova N , Lindow SE
Ref : Proc Natl Acad Sci U S A , 102 :11064 , 2005
Abstract : Feil_2005_Proc.Natl.Acad.Sci.U.S.A_102_11064
ESTHER : Feil_2005_Proc.Natl.Acad.Sci.U.S.A_102_11064
PubMedSearch : Feil_2005_Proc.Natl.Acad.Sci.U.S.A_102_11064
PubMedID: 16043691
Gene_locus related to this paper: psesm-METX , psesm-q87y20 , psesm-q889k3 , psesy-PIP , psesy-PSPTO2134 , psesy-PSPTO3135 , psesy-SYLD , psesy-SYPC , psesy-SYRE , pseu2-q4zlt8 , pseu2-q4zm40 , pseu2-q4zmb0 , pseu2-q4zmc0 , pseu2-q4zmh2 , pseu2-q4zmw4 , pseu2-q4zn59 , pseu2-q4znb2 , pseu2-q4znm5 , pseu2-q4zpb0 , pseu2-q4zph7 , pseu2-q4zpw6 , pseu2-q4zq18 , pseu2-q4zq29 , pseu2-q4zqk3 , pseu2-q4zr46 , pseu2-q4zrk3 , pseu2-q4zrq0 , pseu2-q4zrr1 , pseu2-q4zrt9 , pseu2-q4zs33 , pseu2-q4zs84 , pseu2-q4zs88 , pseu2-q4zsh3 , pseu2-q4zt45 , pseu2-q4zt74 , pseu2-q4zta6 , pseu2-q4zte9 , pseu2-q4zts5 , pseu2-q4zun8 , pseu2-q4zuv2 , pseu2-q4zuw1 , pseu2-q4zv19 , pseu2-q4zv57 , pseu2-q4zvi1 , pseu2-q4zvi2 , pseu2-q4zw50 , pseu2-q4zwq3 , pseu2-q4zwv7 , pseu2-q4zxj5 , pseu2-q4zxs0 , pseu2-q4zz02 , pseu2-q4zzm1 , pseu2-q4zzm4 , pseu2-q500r7 , pseu2-q4zqx8

Title : Draft sequencing and comparative genomics of Xylella fastidiosa strains reveal novel biological insights - Bhattacharyya_2002_Genome.Res_12_1556
Author(s) : Bhattacharyya A , Stilwagen S , Reznik G , Feil H , Feil WS , Anderson I , Bernal A , D'Souza M , Ivanova N , Kapatral V , Larsen N , Los T , Lykidis A , Selkov E, Jr. , Walunas TL , Purcell A , Edwards RA , Hawkins T , Haselkorn R , Overbeek R , Kyrpides NC , Predki PF
Ref : Genome Res , 12 :1556 , 2002
Abstract : Bhattacharyya_2002_Genome.Res_12_1556
ESTHER : Bhattacharyya_2002_Genome.Res_12_1556
PubMedSearch : Bhattacharyya_2002_Genome.Res_12_1556
PubMedID: 12368248

Title : Whole-genome comparative analysis of three phytopathogenic Xylella fastidiosa strains - Bhattacharyya_2002_Proc.Natl.Acad.Sci.U.S.A_99_12403
Author(s) : Bhattacharyya A , Stilwagen S , Ivanova N , D'Souza M , Bernal A , Lykidis A , Kapatral V , Anderson I , Larsen N , Los T , Reznik G , Selkov E, Jr. , Walunas TL , Feil H , Feil WS , Purcell A , Lassez JL , Hawkins TL , Haselkorn R , Overbeek R , Predki PF , Kyrpides NC
Ref : Proceedings of the National Academy of Sciences of the United States of America , 99 :12403 , 2002
Abstract : Bhattacharyya_2002_Proc.Natl.Acad.Sci.U.S.A_99_12403
ESTHER : Bhattacharyya_2002_Proc.Natl.Acad.Sci.U.S.A_99_12403
PubMedSearch : Bhattacharyya_2002_Proc.Natl.Acad.Sci.U.S.A_99_12403
PubMedID: 12205291

Title : Genome sequence and analysis of the oral bacterium Fusobacterium nucleatum strain ATCC 25586 - Kapatral_2002_J.Bacteriol_184_2005
Author(s) : Kapatral V , Anderson I , Ivanova N , Reznik G , Los T , Lykidis A , Bhattacharyya A , Bartman A , Gardner W , Grechkin G , Zhu L , Vasieva O , Chu L , Kogan Y , Chaga O , Goltsman E , Bernal A , Larsen N , D'Souza M , Walunas T , Pusch G , Haselkorn R , Fonstein M , Kyrpides N , Overbeek R
Ref : Journal of Bacteriology , 184 :2005 , 2002
Abstract : Kapatral_2002_J.Bacteriol_184_2005
ESTHER : Kapatral_2002_J.Bacteriol_184_2005
PubMedSearch : Kapatral_2002_J.Bacteriol_184_2005
PubMedID: 11889109
Gene_locus related to this paper: fusnn-FN0616 , fusnn-FN0752 , fusnu-FN0280 , fusnu-FN0484 , fusnu-FN0852 , fusnu-FN1062 , fusnu-FN1128 , fusnu-FN1345 , fusnv-q7p2e5 , fusnv-q7p338

Title : The genome of Methanosarcina mazei: evidence for lateral gene transfer between Bacteria and Archaea. -
Author(s) : Deppenmeier U , Johann A , Hartsch T , Merkl R , Martinez-Arias R , Henne A , Wiezer A , Baeumer S , Brueggemann H , Lienard T , Christmann A , Boemecke M , Bhattacharyya A , Lykidis A , Overbeek R , Klenk H-P , Fritz H-J
Ref : J Mol Microbiol Biotechnol , 4 :453 , 2002
PubMedID: 12125824
Gene_locus related to this paper: metma-MM0529 , metma-MM1373 , metma-MM2426 , metma-MM2553 , metma-MM2650 , metma-MM3122 , metma-MM3198 , metma-MM3308 , metma-q8pw23