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Report for Bateman A

General

Full name : Bateman Alex

First name : Alex

Mail : European Bioinformatics Institute (EMBL-EBI)

Zip Code :

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Country : United Kingdom

Email : agb@ebi.ac.uk

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References (10)

Title : InterPro in 2022 - Paysan-Lafosse_2023_Nucleic.Acids.Res_51_D418
Author(s) : Paysan-Lafosse T , Blum M , Chuguransky S , Grego T , Pinto BL , Salazar GA , Bileschi ML , Bork P , Bridge A , Colwell L , Gough J , Haft DH , Letunic I , Marchler-Bauer A , Mi H , Natale DA , Orengo CA , Pandurangan AP , Rivoire C , Sigrist CJA , Sillitoe I , Thanki N , Thomas PD , Tosatto SCE , Wu CH , Bateman A
Ref : Nucleic Acids Research , 51 :D418 , 2023
Abstract : Paysan-Lafosse_2023_Nucleic.Acids.Res_51_D418
ESTHER : Paysan-Lafosse_2023_Nucleic.Acids.Res_51_D418
PubMedSearch : Paysan-Lafosse_2023_Nucleic.Acids.Res_51_D418
PubMedID: 36350672

Title : Highly accurate protein structure prediction for the human proteome - Tunyasuvunakool_2021_Nature_596_590
Author(s) : Tunyasuvunakool K , Adler J , Wu Z , Green T , Zielinski M , idek A , Bridgland A , Cowie A , Meyer C , Laydon A , Velankar S , Kleywegt GJ , Bateman A , Evans R , Pritzel A , Figurnov M , Ronneberger O , Bates R , Kohl SAA , Potapenko A , Ballard AJ , Romera-Paredes B , Nikolov S , Jain R , Clancy E , Reiman D , Petersen S , Senior AW , Kavukcuoglu K , Birney E , Kohli P , Jumper J , Hassabis D
Ref : Nature , 596 :590 , 2021
Abstract : Tunyasuvunakool_2021_Nature_596_590
ESTHER : Tunyasuvunakool_2021_Nature_596_590
PubMedSearch : Tunyasuvunakool_2021_Nature_596_590
PubMedID: 34293799

Title : How to use the MEROPS database and website to help understand peptidase specificity - Rawlings_2021_Protein.Sci_30_83
Author(s) : Rawlings ND , Bateman A
Ref : Protein Science , 30 :83 , 2021
Abstract : Rawlings_2021_Protein.Sci_30_83
ESTHER : Rawlings_2021_Protein.Sci_30_83
PubMedSearch : Rawlings_2021_Protein.Sci_30_83
PubMedID: 32920969

Title : Origins of peptidases - Rawlings_2019_Biochimie_166_4
Author(s) : Rawlings ND , Bateman A
Ref : Biochimie , 166 :4 , 2019
Abstract : Rawlings_2019_Biochimie_166_4
ESTHER : Rawlings_2019_Biochimie_166_4
PubMedSearch : Rawlings_2019_Biochimie_166_4
PubMedID: 31377195

Title : Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat - Babbitt_2015_Database.(Oxford)_2015_bav063
Author(s) : Babbitt PC , Bagos PG , Bairoch A , Bateman A , Chatonnet A , Chen MJ , Craik DJ , Finn RD , Gloriam D , Haft DH , Henrissat B , Holliday GL , Isberg V , Kaas Q , Landsman D , Lenfant N , Manning G , Nagano N , Srinivasan N , O'Donovan C , Pruitt KD , Sowdhamini R , Rawlings ND , Saier MH, Jr. , Sharman JL , Spedding M , Tsirigos KD , Vastermark A , Vriend G
Ref : Database (Oxford) , 2015 :bav063 , 2015
Abstract : Babbitt_2015_Database.(Oxford)_2015_bav063
ESTHER : Babbitt_2015_Database.(Oxford)_2015_bav063
PubMedSearch : Babbitt_2015_Database.(Oxford)_2015_bav063
PubMedID: 26284514

Title : Key challenges for the creation and maintenance of specialist protein resources - Holliday_2015_Proteins_83_1005
Author(s) : Holliday GL , Bairoch A , Bagos PG , Chatonnet A , Craik DJ , Finn RD , Henrissat B , Landsman D , Manning G , Nagano N , O'Donovan C , Pruitt KD , Rawlings ND , Saier MH, Jr. , Sowdhamini R , Spedding M , Srinivasan N , Vriend G , Babbitt PC , Bateman A
Ref : Proteins , 83 :1005 , 2015
Abstract : Holliday_2015_Proteins_83_1005
ESTHER : Holliday_2015_Proteins_83_1005
PubMedSearch : Holliday_2015_Proteins_83_1005
PubMedID: 25820941

Title : Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling - Clarke_2013_Genome.Biol_14_R11
Author(s) : Clarke M , Lohan AJ , Liu B , Lagkouvardos I , Roy S , Zafar N , Bertelli C , Schilde C , Kianianmomeni A , Burglin TR , Frech C , Turcotte B , Kopec KO , Synnott JM , Choo C , Paponov I , Finkler A , Heng Tan CS , Hutchins AP , Weinmeier T , Rattei T , Chu JS , Gimenez G , Irimia M , Rigden DJ , Fitzpatrick DA , Lorenzo-Morales J , Bateman A , Chiu CH , Tang P , Hegemann P , Fromm H , Raoult D , Greub G , Miranda-Saavedra D , Chen N , Nash P , Ginger ML , Horn M , Schaap P , Caler L , Loftus BJ
Ref : Genome Biol , 14 :R11 , 2013
Abstract : Clarke_2013_Genome.Biol_14_R11
ESTHER : Clarke_2013_Genome.Biol_14_R11
PubMedSearch : Clarke_2013_Genome.Biol_14_R11
PubMedID: 23375108
Gene_locus related to this paper: acaca-l8gel0 , acaca-l8gri8 , acaca-l8h8h3 , acaca-l8gtb6 , acaca-l8gr27 , acaca-l8h9l6 , acaca-l8hhi6 , acaca-l8grd3 , acaca-l8gju3 , acaca-l8h8t7 , acaca-l8h0a7

Title : MEROPS: the database of proteolytic enzymes, their substrates and inhibitors - Rawlings_2012_Nucleic.Acids.Res_40_D343
Author(s) : Rawlings ND , Barrett AJ , Bateman A
Ref : Nucleic Acids Research , 40 :D343 , 2012
Abstract : Rawlings_2012_Nucleic.Acids.Res_40_D343
ESTHER : Rawlings_2012_Nucleic.Acids.Res_40_D343
PubMedSearch : Rawlings_2012_Nucleic.Acids.Res_40_D343
PubMedID: 22086950

Title : Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2) - Bentley_2002_Nature_417_141
Author(s) : Bentley SD , Chater KF , Cerdeno-Tarraga AM , Challis GL , Thomson NR , James KD , Harris DE , Quail MA , Kieser H , Harper D , Bateman A , Brown S , Chandra G , Chen CW , Collins M , Cronin A , Fraser A , Goble A , Hidalgo J , Hornsby T , Howarth S , Huang CH , Kieser T , Larke L , Murphy L , Oliver K , O'Neil S , Rabbinowitsch E , Rajandream MA , Rutherford K , Rutter S , Seeger K , Saunders D , Sharp S , Squares R , Squares S , Taylor K , Warren T , Wietzorrek A , Woodward J , Barrell BG , Parkhill J , Hopwood DA
Ref : Nature , 417 :141 , 2002
Abstract : Bentley_2002_Nature_417_141
ESTHER : Bentley_2002_Nature_417_141
PubMedSearch : Bentley_2002_Nature_417_141
PubMedID: 12000953
Gene_locus related to this paper: strco-cxest , strco-cxest2 , strco-ester , strco-estli , strco-MMYT , strco-ORF3 , strco-q9f2m1 , strco-q9rdq9 , strco-q9x8r0 , strco-SC1A6.21 , strco-SC3F7.14 , strco-SC4C2.18 , strco-SC10F4.23 , strco-SCBAC20F6.10 , strco-SCD95A , strco-SCE8.12C , strco-SCE63.01 , strco-SCF43.16C , strco-SCJ9A.33C , strco-SCO0047 , strco-SCO0135 , strco-SCO0490 , strco-SCO0503 , strco-SCO0556.1 , strco-SCO0556.2 , strco-SCO1265 , strco-SCO2123 , strco-SCO2516 , strco-SCO2723 , strco-SCO2761 , strco-SCO3396 , strco-SCO3772 , strco-SCO4160 , strco-SCO4900 , strco-SCO5215 , strco-SCO5986 , strco-SCO6351 , strco-SCO6488 , strco-SCO7057 , strco-SCO7121 , strco-SCO7396 , strco-SCO7609 , strco-SCOT , strco-SLPD , strco-TAP

Title : The InterPro database, an integrated documentation resource for protein families, domains and functional sites - Apweiler_2001_Nucleic.Acids.Res_29_37
Author(s) : Apweiler R , Attwood TK , Bairoch A , Bateman A , Birney E , Biswas M , Bucher P , Cerutti L , Corpet F , Croning MD , Durbin R , Falquet L , Fleischmann W , Gouzy J , Hermjakob H , Hulo N , Jonassen I , Kahn D , Kanapin A , Karavidopoulou Y , Lopez R , Marx B , Mulder NJ , Oinn TM , Pagni M , Servant F , Sigrist CJ , Zdobnov EM
Ref : Nucleic Acids Research , 29 :37 , 2001
Abstract : Apweiler_2001_Nucleic.Acids.Res_29_37
ESTHER : Apweiler_2001_Nucleic.Acids.Res_29_37
PubMedSearch : Apweiler_2001_Nucleic.Acids.Res_29_37
PubMedID: 11125043